Pre_GI: BLASTN Hits

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Query: NC_009656:3869281 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 3869281, End: 3894099, Length: 24819

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome03729BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome03445BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome02910BLASTN svgBLASTP svg
NC_011992:1318691*1318691134516726477Acidovorax ebreus TPSY, complete genome02799BLASTN svgBLASTP svg
NC_018691:30418513041851306454422694Alcanivorax dieselolei B5 chromosome, complete genome02732BLASTN svgBLASTP svg
NC_010170:22469932246993226783320841Bordetella petrii, complete genome01965BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome01935BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome01923BLASTN svgBLASTP svg
NC_010002:30023543002354302560623253Delftia acidovorans SPH-1, complete genome01526BLASTN svgBLASTP svg
NC_008782:3110744*3110744313966428921Acidovorax sp. JS42, complete genome01513BLASTN svgBLASTP svg
NC_021150:36671763667176369462327448Azotobacter vinelandii CA6, complete genome01481BLASTN svgBLASTP svg
NC_012560:36671773667177369462427448Azotobacter vinelandii DJ, complete genome01481BLASTN svgBLASTP svg
NC_015422:16943631694363172115326791Alicycliphilus denitrificans K601 chromosome, complete genome01247BLASTN svgBLASTP svg
NC_008752:72518972518977609450906Acidovorax avenae subsp. citrulli AAC00-1, complete genome01183BLASTN svgBLASTP svg
NC_008390:2156188*2156188218229326106Burkholderia cepacia AMMD chromosome 1, complete sequence0706BLASTN svgBLASTP svg
NC_008786:41026064102606412154718942Verminephrobacter eiseniae EF01-2, complete genome2e-152547BLASTN svgBLASTP svg
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-117430BLASTN svgBLASTP svg
NC_008577:14550001455000148935334354Shewanella sp. ANA-3 chromosome 1, complete sequence4e-67264BLASTN svgBLASTP svg
NC_015740:18453701845370186638521016Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-55224BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome3e-55224BLASTN svgBLASTP svg
NC_015410:30934653093465315702663562Pseudomonas mendocina NK-01 chromosome, complete genome5e-48200BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence2e-41178BLASTN svgBLASTP svg
NC_014500:84249384249388059638104Dickeya dadantii 3937 chromosome, complete genome6e-29137BLASTN svgBLASTP svg
NC_007963:81414881414884084326696Chromohalobacter salexigens DSM 3043, complete genome4e-27131BLASTN svgBLASTP svg
NC_012912:12956531295653131862422972Dickeya zeae Ech1591, complete genome4e-27131BLASTN svgBLASTP svg
NC_014541:39275003927500394969522196Ferrimonas balearica DSM 9799 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_014722:1467996*1467996149010322108Burkholderia rhizoxinica HKI 454, complete genome9e-22113BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome9e-22113BLASTN svgBLASTP svg
NC_006087:23750023750026462927130Leifsonia xyli subsp. xyli str. CTCB07, complete genome9e-22113BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome9e-22113BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-19105BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome2e-19105BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_006087:676318*67631869499818681Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_006087:177375*17737520205824684Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007951:29046442904644294513440491Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_011992:392534*39253441503522502Acidovorax ebreus TPSY, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008146:17480261748026180688658861Mycobacterium sp. MCS, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015125:1136734*1136734116252925796Microbacterium testaceum StLB037, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_006087:1483761*1483761150739223632Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010508:981377*981377100519623820Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_009074:2970435*2970435301145841024Burkholderia pseudomallei 668 chromosome I, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_010804:831000*83100085316922170Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-1075.8BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015434:24600532460053249159931547Verrucosispora maris AB-18-032 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010617:77491477491482823353320Kocuria rhizophila DC2201, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008542:1021848*1021848105088429037Burkholderia cenocepacia HI2424 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_008060:47686147686150729730437Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_006087:24707082470708250154730840Leifsonia xyli subsp. xyli str. CTCB07, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015138:20697392069739210074231004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_009092:28338652833865286027226408Shewanella loihica PV-4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013169:872698726911060923341Kytococcus sedentarius DSM 20547, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_013722:31174423117442314053923098Xanthomonas albilineans, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010407:11144081114408113894624539Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-0661.9BLASTN svgBLASTP svg