Pre_GI: BLASTN Hits

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Query: NC_009651:19909 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,

Start: 19909, End: 43328, Length: 23420

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome06881BLASTN svgBLASTP svg
NC_004741:25930122593012261557622565Shigella flexneri 2a str. 2457T, complete genome03721BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str03077BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete02635BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02625BLASTN svgBLASTP svg
NC_014836:29195082919508294399924492Desulfurispirillum indicum S5 chromosome, complete genome02621BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome02615BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome02611BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete02611BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02442BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome02002BLASTN svgBLASTP svg
NC_013446:27610002761000280309942100Comamonas testosteroni CNB-2, complete genome01798BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid01628BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,01626BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,01620BLASTN svgBLASTP svg
NC_008344:669498*66949869235322856Nitrosomonas eutropha C91, complete genome01447BLASTN svgBLASTP svg
NC_008344:23747612374761240364328883Nitrosomonas eutropha C91, complete genome01447BLASTN svgBLASTP svg
NC_003919:28240002824000285062126622Xanthomonas axonopodis pv. citri str. 306, complete genome2e-127464BLASTN svgBLASTP svg
NC_008782:42293064229306425380624501Acidovorax sp. JS42, complete genome2e-90341BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome3e-83317BLASTN svgBLASTP svg
NC_011749:34056*340565613322078Escherichia coli UMN026 plasmid p1ESCUM, complete sequence3e-77297BLASTN svgBLASTP svg
NC_011992:35505663550566357056119996Acidovorax ebreus TPSY, complete genome6e-66260BLASTN svgBLASTP svg
NC_014924:21081162108116214188933774Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_007086:39672339672342172325001Xanthomonas campestris pv. campestris str. 8004, complete genome5e-20107BLASTN svgBLASTP svg
NC_003902:39600039600042428128282Xanthomonas campestris pv. campestris str. ATCC 33913, complete5e-20107BLASTN svgBLASTP svg
NC_014924:30654303065430309278427355Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome8e-19103BLASTN svgBLASTP svg
NC_013720:545829*54582957251426686Pirellula staleyi DSM 6068, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete8e-1383.8BLASTN svgBLASTP svg
NC_010943:44766544476654449856421911Stenotrophomonas maltophilia K279a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010694:2492378*2492378251782925452Erwinia tasmaniensis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013960:23669102366910239222125312Nitrosococcus halophilus Nc4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg