Pre_GI: BLASTN Hits

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Query: NC_009512:3251545 Pseudomonas putida F1, complete genome

Start: 3251545, End: 3277203, Length: 25659

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010170:39442283944228399478350556Bordetella petrii, complete genome01935BLASTN svgBLASTP svg
NC_015733:27201832720183276059940417Pseudomonas putida S16 chromosome, complete genome1e-116428BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete3e-71278BLASTN svgBLASTP svg
NC_008313:19565001956500197559919100Ralstonia eutropha H16 chromosome 1, complete sequence2e-53218BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_011662:23201002320100236647446375Thauera sp. MZ1T, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015379:24829012482901250376220862Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-1383.8BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007951:36317723631772365497223201Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011894:30900003090000310978319784Methylobacterium nodulans ORS 2060, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_016002:24539192453919250029546377Pseudogulbenkiania sp. NH8B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007973:14117141411714144204530332Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_015663:37427383742738376655823821Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011666:15724871572487160176329277Methylocella silvestris BL2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:27569452756945277931722373Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013859:9500*95003559926100Azospirillum sp. B510 plasmid pAB510e, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_012808:28862822886282290930323022Methylobacterium extorquens AM1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009512:32825003282500331588733388Pseudomonas putida F1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008699:22943612294361234337849018Nocardioides sp. JS614, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011988:1036618*1036618106496728350Agrobacterium vitis S4 chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg