Query: NC_009512:2238437 Pseudomonas putida F1, complete genome
Start: 2238437, End: 2262599, Length: 24163
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002947:4293252* | 4293252 | 4317469 | 24218 | Pseudomonas putida KT2440, complete genome | 0 | 15260 | BLASTN svg | BLASTP svg |
NC_011770:3735162* | 3735162 | 3763836 | 28675 | Pseudomonas aeruginosa LESB58, complete genome | 4e-147 | 529 | BLASTN svg | BLASTP svg |
NC_009512:4375452 | 4375452 | 4405394 | 29943 | Pseudomonas putida F1, complete genome | 2e-72 | 281 | BLASTN svg | BLASTP svg |
NC_004129:4596040* | 4596040 | 4621282 | 25243 | Pseudomonas fluorescens Pf-5, complete genome | 1e-70 | 276 | BLASTN svg | BLASTP svg |
NC_009434:3611738* | 3611738 | 3748875 | 137138 | Pseudomonas stutzeri A1501, complete genome | 2e-62 | 248 | BLASTN svg | BLASTP svg |
NC_002947:4805060 | 4805060 | 4831188 | 26129 | Pseudomonas putida KT2440, complete genome | 3e-52 | 214 | BLASTN svg | BLASTP svg |
NC_020209:47504* | 47504 | 126229 | 78726 | Pseudomonas poae RE*1-1-14, complete genome | 5e-45 | 190 | BLASTN svg | BLASTP svg |
NC_009512:5632591 | 5632591 | 5686531 | 53941 | Pseudomonas putida F1, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
NC_007492:2994036 | 2994036 | 3023113 | 29078 | Pseudomonas fluorescens PfO-1, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_010087:319063 | 319063 | 367599 | 48537 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010801:550270 | 550270 | 596634 | 46365 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_014323:2680085 | 2680085 | 2724171 | 44087 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_002947:2809591* | 2809591 | 2832649 | 23059 | Pseudomonas putida KT2440, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009512:1691930* | 1691930 | 1718076 | 26147 | Pseudomonas putida F1, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_012792:962292 | 962292 | 990683 | 28392 | Variovorax paradoxus S110 chromosome 2, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_002947:5386489 | 5386489 | 5414167 | 27679 | Pseudomonas putida KT2440, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_002947:1268089 | 1268089 | 1293430 | 25342 | Pseudomonas putida KT2440, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_002947:3492379 | 3492379 | 3517099 | 24721 | Pseudomonas putida KT2440, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015556:130437 | 130437 | 161946 | 31510 | Pseudomonas fulva 12-X chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008786:3045770 | 3045770 | 3073191 | 27422 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015733:3595882 | 3595882 | 3620338 | 24457 | Pseudomonas putida S16 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_002947:2157648 | 2157648 | 2192388 | 34741 | Pseudomonas putida KT2440, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |