Query: NC_009480:31412 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete
Start: 31412, End: 78542, Length: 47131
Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009479:34001 | 34001 | 56213 | 22213 | Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid | 0 | 2502 | BLASTN svg | BLASTP svg |
NC_010407:32960* | 32960 | 51633 | 18674 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 1292 | BLASTN svg | BLASTP svg |
NC_010408:79855 | 79855 | 105999 | 26145 | Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, | 0 | 993 | BLASTN svg | BLASTP svg |
NC_010407:3132683 | 3132683 | 3154890 | 22208 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 3e-140 | 507 | BLASTN svg | BLASTP svg |
NC_010399:13222 | 13222 | 35599 | 22378 | Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete | 2e-122 | 448 | BLASTN svg | BLASTP svg |
NC_010407:1775227 | 1775227 | 1800548 | 25322 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 2e-88 | 335 | BLASTN svg | BLASTP svg |
NC_009664:4423829* | 4423829 | 4686013 | 262185 | Kineococcus radiotolerans SRS30216, complete genome | 1e-25 | 127 | BLASTN svg | BLASTP svg |
NC_018681:7692560 | 7692560 | 7716412 | 23853 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 2e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_013510:810525 | 810525 | 831599 | 21075 | Thermomonospora curvata DSM 43183, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015125:3284095 | 3284095 | 3308099 | 24005 | Microbacterium testaceum StLB037, complete genome | 4e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015387:155728 | 155728 | 178932 | 23205 | Marinithermus hydrothermalis DSM 14884 chromosome, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014923:1249267* | 1249267 | 1272911 | 23645 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |