Query: NC_008543:2696377 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence
Start: 2696377, End: 2724667, Length: 28291
Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008061:2548849* | 2548849 | 2571099 | 22251 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 0 | 27020 | BLASTN svg | BLASTP svg |
| NC_010508:1898547 | 1898547 | 1924851 | 26305 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 0 | 7832 | BLASTN svg | BLASTP svg |
| NC_010515:1618093* | 1618093 | 1655159 | 37067 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 0 | 5218 | BLASTN svg | BLASTP svg |
| NC_008060:2913671* | 2913671 | 2947089 | 33419 | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence | 1e-110 | 408 | BLASTN svg | BLASTP svg |
| NC_010087:319063 | 319063 | 367599 | 48537 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 4e-98 | 367 | BLASTN svg | BLASTP svg |
| NC_010804:2206000* | 2206000 | 2228934 | 22935 | Burkholderia multivorans ATCC 17616 chromosome 1, complete | 4e-98 | 367 | BLASTN svg | BLASTP svg |
| NC_010801:550270 | 550270 | 596634 | 46365 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 4e-98 | 367 | BLASTN svg | BLASTP svg |
| NC_007434:1322500 | 1322500 | 1354599 | 32100 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 9e-47 | 196 | BLASTN svg | BLASTP svg |
| NC_010508:1865602 | 1865602 | 1889219 | 23618 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 9e-47 | 196 | BLASTN svg | BLASTP svg |
| NC_007951:1928906 | 1928906 | 1952863 | 23958 | Burkholderia xenovorans LB400 chromosome 1, complete sequence | 3e-43 | 184 | BLASTN svg | BLASTP svg |
| NC_008314:1559102 | 1559102 | 1579477 | 20376 | Ralstonia eutropha H16 chromosome 2, complete sequence | 8e-41 | 176 | BLASTN svg | BLASTP svg |
| NC_013859:61586 | 61586 | 91216 | 29631 | Azospirillum sp. B510 plasmid pAB510e, complete sequence | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_019940:1309359 | 1309359 | 1331976 | 22618 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_012792:547967 | 547967 | 587717 | 39751 | Variovorax paradoxus S110 chromosome 2, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
| NC_007384:1763375 | 1763375 | 1783599 | 20225 | Shigella sonnei Ss046, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_008253:3941938* | 3941938 | 3998838 | 56901 | Escherichia coli 536, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_008258:1934479* | 1934479 | 1963069 | 28591 | Shigella flexneri 5 str. 8401, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_010658:1772994* | 1772994 | 1795099 | 22106 | Shigella boydii CDC 3083-94, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_010660:86445 | 86445 | 109420 | 22976 | Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_007607:87000 | 87000 | 123628 | 36629 | Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_011958:735755 | 735755 | 789450 | 53696 | Rhodobacter sphaeroides KD131 chromosome 2, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_007494:714525 | 714525 | 740749 | 26225 | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_019940:2731105 | 2731105 | 2760614 | 29510 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015588:2939747* | 2939747 | 2962697 | 22951 | Isoptericola variabilis 225 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_005125:760721 | 760721 | 804748 | 44028 | Gloeobacter violaceus PCC 7421, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015422:3836911* | 3836911 | 3860312 | 23402 | Alicycliphilus denitrificans K601 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_013205:854983 | 854983 | 881330 | 26348 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_013947:3534209 | 3534209 | 3558586 | 24378 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008314:1202963 | 1202963 | 1221383 | 18421 | Ralstonia eutropha H16 chromosome 2, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |