Pre_GI: BLASTN Hits

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Query: NC_008526:2373190 Lactobacillus casei ATCC 334, complete genome

Start: 2373190, End: 2396656, Length: 23467

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010999:25160002516000253888722888Lactobacillus casei, complete genome011530BLASTN svgBLASTP svg
NC_014334:23079502307950232672418775Lactobacillus casei str. Zhang chromosome, complete genome011470BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome03120BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome02298BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02298BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02286BLASTN svgBLASTP svg
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome02274BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02272BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome02062BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome02054BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome02054BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome02052BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02024BLASTN svgBLASTP svg
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome01980BLASTN svgBLASTP svg
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome5e-131476BLASTN svgBLASTP svg
NC_013198:24580802458080247900920930Lactobacillus rhamnosus GG, complete genome1e-110408BLASTN svgBLASTP svg