Query: NC_008525:561000 Pediococcus pentosaceus ATCC 25745, complete genome
Start: 561000, End: 587099, Length: 26100
Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013198:394000* | 394000 | 467958 | 73959 | Lactobacillus rhamnosus GG, complete genome | 0 | 2480 | BLASTN svg | BLASTP svg |
NC_008526:565902 | 565902 | 590932 | 25031 | Lactobacillus casei ATCC 334, complete genome | 0 | 2460 | BLASTN svg | BLASTP svg |
NC_010999:623489 | 623489 | 646097 | 22609 | Lactobacillus casei, complete genome | 0 | 2442 | BLASTN svg | BLASTP svg |
NC_008526:1973500 | 1973500 | 1993446 | 19947 | Lactobacillus casei ATCC 334, complete genome | 0 | 1953 | BLASTN svg | BLASTP svg |
NC_010999:2059738 | 2059738 | 2082247 | 22510 | Lactobacillus casei, complete genome | 0 | 1947 | BLASTN svg | BLASTP svg |
NC_010999:1381497* | 1381497 | 1407189 | 25693 | Lactobacillus casei, complete genome | 0 | 1941 | BLASTN svg | BLASTP svg |
NC_015428:21724 | 21724 | 40308 | 18585 | Lactobacillus buchneri NRRL B-30929 chromosome, complete genome | 0 | 1927 | BLASTN svg | BLASTP svg |
NC_015602:1949610 | 1949610 | 1972099 | 22490 | Lactobacillus kefiranofaciens ZW3 chromosome, complete genome | 0 | 1915 | BLASTN svg | BLASTP svg |
NC_008528:331260 | 331260 | 354633 | 23374 | Oenococcus oeni PSU-1, complete genome | 0 | 1852 | BLASTN svg | BLASTP svg |
NC_010610:861194 | 861194 | 883923 | 22730 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 1810 | BLASTN svg | BLASTP svg |
NC_010610:1649500 | 1649500 | 1672659 | 23160 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 888 | BLASTN svg | BLASTP svg |
NC_010610:1178430 | 1178430 | 1228977 | 50548 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 886 | BLASTN svg | BLASTP svg |
NC_014106:244831 | 244831 | 265099 | 20269 | Lactobacillus crispatus ST1, complete genome | 0 | 737 | BLASTN svg | BLASTP svg |
NC_018528:1932000 | 1932000 | 1970099 | 38100 | Lactobacillus helveticus R0052 chromosome, complete genome | 0 | 664 | BLASTN svg | BLASTP svg |
NC_014727:2036340 | 2036340 | 2054335 | 17996 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 7e-106 | 392 | BLASTN svg | BLASTP svg |
NC_010610:1580483* | 1580483 | 1629244 | 48762 | Lactobacillus fermentum IFO 3956, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
NC_010610:2013659 | 2013659 | 2051777 | 38119 | Lactobacillus fermentum IFO 3956, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_008497:32160 | 32160 | 50981 | 18822 | Lactobacillus brevis ATCC 367, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_010610:269380* | 269380 | 295599 | 26220 | Lactobacillus fermentum IFO 3956, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_008526:343445 | 343445 | 367272 | 23828 | Lactobacillus casei ATCC 334, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_007929:67810* | 67810 | 92457 | 24648 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |