Pre_GI: BLASTN Hits

Some Help

Query: NC_008525:561000 Pediococcus pentosaceus ATCC 25745, complete genome

Start: 561000, End: 587099, Length: 26100

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome6e-29137BLASTN svgBLASTP svg
NC_015428:21724217244030818585Lactobacillus buchneri NRRL B-30929 chromosome, complete genome01927BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome2e-25125BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome02460BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome01953BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome02442BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome01947BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome01941BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome0737BLASTN svgBLASTP svg
NC_014727:20363402036340205433517996Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,7e-106392BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome01810BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome0888BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome0886BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome3e-34155BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome2e-29139BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome2e-26129BLASTN svgBLASTP svg
NC_018528:19320001932000197009938100Lactobacillus helveticus R0052 chromosome, complete genome0664BLASTN svgBLASTP svg
NC_015602:19496101949610197209922490Lactobacillus kefiranofaciens ZW3 chromosome, complete genome01915BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome02480BLASTN svgBLASTP svg
NC_007929:67810*678109245724648Lactobacillus salivarius subsp. salivarius UCC118, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008528:33126033126035463323374Oenococcus oeni PSU-1, complete genome01852BLASTN svgBLASTP svg