Pre_GI: BLASTN Hits

Some Help

Query: NC_007952:1453000 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1453000, End: 1479862, Length: 26863

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007951:74050074050076287822379Burkholderia xenovorans LB400 chromosome 1, complete sequence01667BLASTN svgBLASTP svg
NC_010508:93386293386296238928528Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence01481BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence01376BLASTN svgBLASTP svg
NC_009080:18157681815768183436818601Burkholderia mallei NCTC 10247 chromosome II, complete sequence01269BLASTN svgBLASTP svg
NC_009076:30451393045139306397918841Burkholderia pseudomallei 1106a chromosome I, complete sequence01269BLASTN svgBLASTP svg
NC_008836:27803392780339280541925081Burkholderia mallei NCTC 10229 chromosome II, complete sequence01269BLASTN svgBLASTP svg
NC_007434:34529853452985347302220038Burkholderia pseudomallei 1710b chromosome I, complete sequence01269BLASTN svgBLASTP svg
NC_006350:31951653195165321400518841Burkholderia pseudomallei K96243 chromosome 1, complete sequence01261BLASTN svgBLASTP svg
NC_008785:91441191441194029125881Burkholderia mallei SAVP1 chromosome II, complete sequence01261BLASTN svgBLASTP svg
NC_009074:30297163029716304855618841Burkholderia pseudomallei 668 chromosome I, complete sequence01261BLASTN svgBLASTP svg
NC_006348:20717492071749209535023602Burkholderia mallei ATCC 23344 chromosome 1, complete sequence01253BLASTN svgBLASTP svg
NC_010622:25761102576110260423628127Burkholderia phymatum STM815 chromosome 1, complete sequence01219BLASTN svgBLASTP svg
NC_008390:81857181857184350924939Burkholderia cepacia AMMD chromosome 1, complete sequence01207BLASTN svgBLASTP svg
NC_010551:84695384695386809921147Burkholderia ambifaria MC40-6 chromosome 1, complete sequence01122BLASTN svgBLASTP svg
NC_010804:67108167108170545734377Burkholderia multivorans ATCC 17616 chromosome 1, complete4e-172613BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome1e-76295BLASTN svgBLASTP svg
NC_007973:29520042952004297379621793Ralstonia metallidurans CH34 chromosome 1, complete sequence7e-72280BLASTN svgBLASTP svg
NC_007347:76745576745579935531901Ralstonia eutropha JMP134 chromosome 1, complete sequence2e-53218BLASTN svgBLASTP svg
NC_008313:19910001991000200925118252Ralstonia eutropha H16 chromosome 1, complete sequence8e-44186BLASTN svgBLASTP svg
NC_015677:89667389667391821221540Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome2e-38168BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-35159BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome2e-35159BLASTN svgBLASTP svg
NC_010688:4235528*4235528426665131124Xanthomonas campestris pv. campestris, complete genome2e-35159BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome7e-35157BLASTN svgBLASTP svg
NC_014394:30367583036758307034433587Gallionella capsiferriformans ES-2 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-34155BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome3e-34155BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-34155BLASTN svgBLASTP svg
NC_012791:82137182137185170230332Variovorax paradoxus S110 chromosome 1, complete genome2e-32149BLASTN svgBLASTP svg
NC_015947:56812456812459380225679Burkholderia sp. JV3 chromosome, complete genome7e-32147BLASTN svgBLASTP svg
NC_014722:22604892260489228672626238Burkholderia rhizoxinica HKI 454, complete genome3e-31145BLASTN svgBLASTP svg
NC_008702:2039462*2039462206354724086Azoarcus sp. BH72, complete genome1e-30143BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome4e-30141BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-30141BLASTN svgBLASTP svg
NC_011894:43605774360577439709936523Methylobacterium nodulans ORS 2060, complete genome7e-29137BLASTN svgBLASTP svg
NC_009138:11389171138917117310234186Herminiimonas arsenicoxydans, complete genome3e-28135BLASTN svgBLASTP svg
NC_010682:66127266127268656525294Ralstonia pickettii 12J chromosome 1, complete sequence6e-26127BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome6e-26127BLASTN svgBLASTP svg
NC_005125:34202703420270344513224863Gloeobacter violaceus PCC 7421, complete genome1e-24123BLASTN svgBLASTP svg
NC_005773:11353741135374117481539442Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-24123BLASTN svgBLASTP svg
NC_008313:31124403112440314759935160Ralstonia eutropha H16 chromosome 1, complete sequence1e-24123BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_002947:19886521988652202146032809Pseudomonas putida KT2440, complete genome4e-24121BLASTN svgBLASTP svg
NC_019940:33417943341794336057818785Thioflavicoccus mobilis 8321 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome2e-22115BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome2e-22115BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome2e-22115BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_007952:28129962812996283638323388Burkholderia xenovorans LB400 chromosome 2, complete sequence2e-20109BLASTN svgBLASTP svg
NC_014006:924417*92441794759923183Sphingobium japonicum UT26S chromosome 1, complete genome2e-19105BLASTN svgBLASTP svg
NC_009720:39681013968101399101722917Xanthobacter autotrophicus Py2, complete genome9e-19103BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome4e-18101BLASTN svgBLASTP svg
NC_007760:49111814911181493806026880Anaeromyxobacter dehalogenans 2CP-C, complete genome4e-18101BLASTN svgBLASTP svg
NC_010995:11016141101614112447222859Cellvibrio japonicus Ueda107, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011992:57100057100058859917600Acidovorax ebreus TPSY, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013422:17326771732677175579823122Halothiobacillus neapolitanus c2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_012856:60476760476763328028514Ralstonia pickettii 12D chromosome 1, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_019673:8799533*8799533883442634894Saccharothrix espanaensis DSM 44229 complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012815:16039161603916165709953184Bifidobacterium animalis subsp. lactis DSM 10140, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012814:15992411599241165827959039Bifidobacterium animalis subsp. lactis Bl-04, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_010125:3467379*3467379349031122933Gluconacetobacter diazotrophicus PAl 5, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008343:20500002050000207522725228Granulibacter bethesdensis CGDNIH1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010424:17784591778459180631227854Candidatus Desulforudis audaxviator MP104C, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014958:31311913131191315796026770Deinococcus maricopensis DSM 21211 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011757:42057944205794422846522672Methylobacterium chloromethanicum CM4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011891:49319614931961494959917639Anaeromyxobacter dehalogenans 2CP-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010725:45119394511939454748235544Methylobacterium populi BJ001, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006513:88112088112091309931980Azoarcus sp. EbN1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005125:48050048050051032729828Gloeobacter violaceus PCC 7421, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015152:38950038950042209932600Spirochaeta sp. Buddy chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015437:918614*91861494272824115Selenomonas sputigena ATCC 35185 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007516:18477451847745186809920355Synechococcus sp. CC9605, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004369:37110937110940147530367Corynebacterium efficiens YS-314, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008820:919679196715127959313Prochlorococcus marinus str. MIT 9303, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005070:61744861744864381626369Synechococcus sp. WH 8102, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007677:77116877116883459963432Salinibacter ruber DSM 13855, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013714:2086526*2086526215532168796Bifidobacterium dentium Bd1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014816:24462362446236249509148856Asticcacaulis excentricus CB 48 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_001264:28266282666040532140Deinococcus radiodurans R1 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_012997:46721474672147469888626740Teredinibacter turnerae T7901, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014752:23601*236014343619836Neisseria lactamica ST-640, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014972:54414654414658609941954Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013422:16041571604157162347719321Halothiobacillus neapolitanus c2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010676:61098*610988675025653Burkholderia phytofirmans PsJN chromosome 2, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_008596:60095116009511605382644316Mycobacterium smegmatis str. MC2 155, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007298:13348761334876136112026245Dechloromonas aromatica RCB, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015593:2841856*2841856289459952744Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-0869.9BLASTN svgBLASTP svg
NC_014500:14916601491660151533923680Dickeya dadantii 3937 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008553:1038344*1038344106673128388Methanosaeta thermophila PT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002937:12330001233000125601423015Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-0869.9BLASTN svgBLASTP svg
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_012880:91369891369893533721640Dickeya dadantii Ech703, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013209:2782500*2782500280575023251Acetobacter pasteurianus IFO 3283-01, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006361:55462325546232556613019899Nocardia farcinica IFM 10152, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012883:18173581817358184579528438Thermococcus sibiricus MM 739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013522:16833261683326171309929774Thermanaerovibrio acidaminovorans DSM 6589, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013715:1750403*1750403177144221040Rothia mucilaginosa DY-18, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014216:21273702127370215539428025Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010501:15189591518959154333524377Pseudomonas putida W619, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015389:1298689*1298689133142232734Coriobacterium glomerans PW2 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019897:41313374131337414984518509Thermobacillus composti KWC4 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014363:645397*64539768181236416Olsenella uli DSM 7084 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014216:20975002097500212022822729Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013093:74370337437033745991722885Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg