Pre_GI: BLASTN Hits

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Query: NC_007951:2206263 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2206263, End: 2227846, Length: 21584

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence05717BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence05325BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence05077BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence05077BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete04684BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete04248BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete03342BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete03342BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome0646BLASTN svgBLASTP svg
NC_007974:2048000*2048000209210744108Ralstonia metallidurans CH34 chromosome 2, complete sequence5e-128466BLASTN svgBLASTP svg
NC_007974:13817613817617323335058Ralstonia metallidurans CH34 chromosome 2, complete sequence2e-127464BLASTN svgBLASTP svg
NC_007974:11358631135863115837322511Ralstonia metallidurans CH34 chromosome 2, complete sequence2e-127464BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-65258BLASTN svgBLASTP svg
NC_007348:2558500*2558500258100922510Ralstonia eutropha JMP134 chromosome 2, complete sequence2e-38168BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome6e-32147BLASTN svgBLASTP svg
NC_014394:2111985*2111985213209920115Gallionella capsiferriformans ES-2 chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_004757:230541*23054125274022200Nitrosomonas europaea ATCC 19718, complete genome3e-21111BLASTN svgBLASTP svg
NC_004463:55409245540924556841727494Bradyrhizobium japonicum USDA 110, complete genome3e-21111BLASTN svgBLASTP svg
NC_015731:3274739*3274739330258727849Nitrosomonas sp. Is79A3 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome7e-19103BLASTN svgBLASTP svg
NC_007952:31960853196085323399537911Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010170:1324758*1324758137344648689Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:1498253*1498253154638148129Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:20951420951423649426981Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:3908500*3908500394194933450Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:39442283944228399478350556Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007951:19715841971584198959918016Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_007951:47416204741620476397822359Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012997:541648*54164856744125794Teredinibacter turnerae T7901, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012559:25639222563922258927225351Laribacter hongkongensis HLHK9, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007951:29046442904644294513440491Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_007434:1712000*1712000180122589226Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007434:1809946*1809946187124661301Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_012791:2423466*2423466246659343128Variovorax paradoxus S110 chromosome 1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008390:1293823*1293823131887025048Burkholderia cepacia AMMD chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_008313:2629281*2629281264709917819Ralstonia eutropha H16 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_007973:2348481*2348481238802339543Ralstonia metallidurans CH34 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_014972:2089003*2089003210762418622Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019897:4014485*4014485406820053716Thermobacillus composti KWC4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010067:33103363310336336496054625Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-0661.9BLASTN svgBLASTP svg
NC_008786:28507362850736287895428219Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg