Query: NC_007912:4840682 Saccharophagus degradans 2-40, complete genome
Start: 4840682, End: 4859099, Length: 18418
Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007912:4396972* | 4396972 | 4421103 | 24132 | Saccharophagus degradans 2-40, complete genome | 0 | 2809 | BLASTN svg | BLASTP svg |
NC_007912:3921308 | 3921308 | 3939099 | 17792 | Saccharophagus degradans 2-40, complete genome | 0 | 2799 | BLASTN svg | BLASTP svg |
NC_007912:2958000* | 2958000 | 2981798 | 23799 | Saccharophagus degradans 2-40, complete genome | 0 | 2799 | BLASTN svg | BLASTP svg |
NC_007912:2303357 | 2303357 | 2327099 | 23743 | Saccharophagus degradans 2-40, complete genome | 1e-63 | 252 | BLASTN svg | BLASTP svg |
NC_009092:4337617 | 4337617 | 4373805 | 36189 | Shewanella loihica PV-4, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013960:2366910 | 2366910 | 2392221 | 25312 | Nitrosococcus halophilus Nc4 chromosome, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_012997:2254000 | 2254000 | 2281134 | 27135 | Teredinibacter turnerae T7901, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008260:228475* | 228475 | 247599 | 19125 | Alcanivorax borkumensis SK2, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008702:1432952* | 1432952 | 1479977 | 47026 | Azoarcus sp. BH72, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008463:1912348* | 1912348 | 1954182 | 41835 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |