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Query: NC_007912:4840682 Saccharophagus degradans 2-40, complete genome

Start: 4840682, End: 4859099, Length: 18418

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:4396972*4396972442110324132Saccharophagus degradans 2-40, complete genome02809BLASTN svgBLASTP svg
NC_007912:39213083921308393909917792Saccharophagus degradans 2-40, complete genome02799BLASTN svgBLASTP svg
NC_007912:2958000*2958000298179823799Saccharophagus degradans 2-40, complete genome02799BLASTN svgBLASTP svg
NC_007912:23033572303357232709923743Saccharophagus degradans 2-40, complete genome1e-63252BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_013960:23669102366910239222125312Nitrosococcus halophilus Nc4 chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_012997:22540002254000228113427135Teredinibacter turnerae T7901, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008260:228475*22847524759919125Alcanivorax borkumensis SK2, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome9e-0660BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome9e-0660BLASTN svgBLASTP svg