Pre_GI: BLASTN Hits

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Query: NC_007622:1214629 Staphylococcus aureus RF122, complete genome

Start: 1214629, End: 1233559, Length: 18931

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a common strain associated with mastitis in cattle. This organism is responsible for several hundred million dollars worth of annual economic loss to animal production each year. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002952:1291444*1291444131490923466Staphylococcus aureus subsp. aureus MRSA252, complete genome021250BLASTN svgBLASTP svg
NC_009782:1327340*1327340135080023461Staphylococcus aureus subsp. aureus Mu3, complete genome020870BLASTN svgBLASTP svg
NC_004461:921364*92136495875837395Staphylococcus epidermidis ATCC 12228, complete genome01820BLASTN svgBLASTP svg
NC_012121:897866*89786692042622561Staphylococcus carnosus subsp. carnosus TM300, complete genome01088BLASTN svgBLASTP svg
NC_007350:1551457*1551457156963918183Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,01078BLASTN svgBLASTP svg
NC_004722:3777907*3777907379634818442Bacillus cereus ATCC 14579, complete genome7e-65256BLASTN svgBLASTP svg
NC_011772:3787500*3787500381637528876Bacillus cereus G9842, complete genome5e-63250BLASTN svgBLASTP svg
NC_010184:3675424*3675424369841022987Bacillus weihenstephanensis KBAB4, complete genome5e-63250BLASTN svgBLASTP svg
NC_011999:936500*93650096052724028Macrococcus caseolyticus JCSC5402, complete genome7e-62246BLASTN svgBLASTP svg
NC_006274:3697255*3697255372593028676Bacillus cereus E33L, complete genome4e-60240BLASTN svgBLASTP svg
NC_003909:3587695*3587695360609918405Bacillus cereus ATCC 10987, complete genome4e-60240BLASTN svgBLASTP svg
NC_014335:3567931*3567931358636818438Bacillus cereus biovar anthracis str. CI chromosome, complete3e-58234BLASTN svgBLASTP svg
NC_012472:3661912*3661912368119019279Bacillus cereus 03BB102, complete genome3e-58234BLASTN svgBLASTP svg
NC_008600:3643905*3643905366318919285Bacillus thuringiensis str. Al Hakam, complete genome3e-58234BLASTN svgBLASTP svg
NC_005957:3638750*3638750365855919810Bacillus thuringiensis serovar konkukian str. 97-27, complete3e-58234BLASTN svgBLASTP svg
NC_003997:3617000*3617000367460757608Bacillus anthracis str. Ames, complete genome7e-56226BLASTN svgBLASTP svg
NC_005945:3615623*3615623363438618764Bacillus anthracis str. Sterne, complete genome7e-56226BLASTN svgBLASTP svg
NC_007530:3616828*3616828367637859551Bacillus anthracis str. 'Ames Ancestor', complete genome7e-56226BLASTN svgBLASTP svg
NC_007168:1705763*1705763172469118929Staphylococcus haemolyticus JCSC1435, complete genome6e-47196BLASTN svgBLASTP svg
NC_014103:3985897*3985897400890423008Bacillus megaterium DSM319 chromosome, complete genome1e-41178BLASTN svgBLASTP svg
NC_021175:15976131597613162110823496Streptococcus oligofermentans AS 1.3089, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_013511:57371757371759708923373Mycoplasma hominis, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_011852:21131421131423418322870Haemophilus parasuis SH0165, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_003909:3606177*3606177364959943423Bacillus cereus ATCC 10987, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014166:455378*45537847468719310Arcobacter nitrofigilis DSM 7299 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011898:513835*51383553654722713Clostridium cellulolyticum H10, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008245:24652*246526389439243Francisella tularensis subsp. tularensis FSC 198, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008527:740060*74006076330623247Lactococcus lactis subsp. cremoris SK11, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_009004:1770497*1770497179533924843Lactococcus lactis subsp. cremoris MG1363, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_020075:114790*11479013461719828Candidatus Blochmannia chromaiodes str. 640, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007292:11339611339613533421939Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_013216:3376186*3376186339624020055Desulfotomaculum acetoxidans DSM 771, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018604:2303239*2303239232188618648Brachyspira pilosicoli WesB complete genome9e-0969.9BLASTN svgBLASTP svg
NC_018607:2184832*2184832220348618655Brachyspira pilosicoli B2904 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_019970:1343670*1343670136621022541Thermoanaerobacterium thermosaccharolyticum M0795, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015760:61345*613458629324949Streptococcus salivarius CCHSS3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015380:303215*30321532339920185Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013171:824917*82491784961724701Anaerococcus prevotii DSM 20548, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006369:3058000*3058000307977221773Legionella pneumophila str. Lens, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014330:841841*84184186434222502Brachyspira pilosicoli 95/1000 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006570:707280*70728073124223963Francisella tularensis subsp. tularensis Schu 4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007880:1456705*1456705148081024106Francisella tularensis subsp. holarctica, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008245:707984*70798473119423211Francisella tularensis subsp. tularensis FSC 198, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008601:631504*63150465482423321Francisella tularensis subsp. novicida U112, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010336:213148*21314825031237165Francisella philomiragia subsp. philomiragia ATCC 25017, complete6e-0763.9BLASTN svgBLASTP svg
NC_013861:311908*31190833528723380Legionella longbeachae NSW150, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012225:1657248*1657248168304825801Brachyspira hyodysenteriae WA1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008023:1398085*1398085142250824424Streptococcus pyogenes MGAS2096, complete genome9e-0660BLASTN svgBLASTP svg
NC_008021:1374195*1374195139861824424Streptococcus pyogenes MGAS9429, complete genome9e-0660BLASTN svgBLASTP svg
NC_007577:1458657*1458657148585427198Prochlorococcus marinus str. MIT 9312, complete genome9e-0660BLASTN svgBLASTP svg
NC_007297:1379742*1379742140416524424Streptococcus pyogenes MGAS5005, complete genome9e-0660BLASTN svgBLASTP svg