Pre_GI: BLASTN Hits

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Query: NC_006512:728281 Idiomarina loihiensis L2TR, complete genome

Start: 728281, End: 751505, Length: 23225

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008228:2295841*2295841231867322833Pseudoalteromonas atlantica T6c, complete genome1e-26129BLASTN svgBLASTP svg
NC_015566:3622385*3622385364177919395Serratia sp. AS12 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome8e-19103BLASTN svgBLASTP svg
NC_002655:10530821053082107777224691Escherichia coli O157:H7 EDL933, complete genome3e-18101BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009092:1684467*1684467170308618620Shewanella loihica PV-4, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-1797.6BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010067:660659*66065968851527857Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-1797.6BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-1797.6BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-1797.6BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1797.6BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_012917:1840172*1840172189159251421Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013961:2370994*2370994240176230769Erwinia amylovora, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009778:95998295998298509925118Enterobacter sakazakii ATCC BAA-894, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015554:12154011215401123622120821Alteromonas sp. SN2 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014837:1570500*1570500160135230853Pantoea sp. At-9b chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008781:2981868*2981868300465822791Polaromonas naphthalenivorans CJ2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003295:26694802669480269721727738Ralstonia solanacearum GMI1000, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008530:1775841*1775841179784122001Lactobacillus gasseri ATCC 33323, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008563:29099452909945293044120497Escherichia coli APEC O1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007946:28947932894793291753922747Escherichia coli UTI89, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015760:343874*34387436486020987Streptococcus salivarius CCHSS3, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015731:16998916998919231522327Nitrosomonas sp. Is79A3 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014218:253558*25355828008626529Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004757:1021355*1021355105233830984Nitrosomonas europaea ATCC 19718, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010120:78800078800081026622267Neisseria meningitidis 053442, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006512:1722138*1722138174672424587Idiomarina loihiensis L2TR, complete genome3e-0661.9BLASTN svgBLASTP svg