Query: NC_005362:52848 Lactobacillus johnsonii NCC 533, complete genome
Start: 52848, End: 73398, Length: 20551
Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015602:1810500* | 1810500 | 1832602 | 22103 | Lactobacillus kefiranofaciens ZW3 chromosome, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_014724:59000* | 59000 | 80673 | 21674 | Lactobacillus amylovorus GRL 1112 chromosome, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_015214:48999* | 48999 | 70187 | 21189 | Lactobacillus acidophilus 30SC chromosome, complete genome | 6e-47 | 196 | BLASTN svg | BLASTP svg |
NC_006814:51500* | 51500 | 79262 | 27763 | Lactobacillus acidophilus NCFM, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
NC_018528:65000* | 65000 | 91776 | 26777 | Lactobacillus helveticus R0052 chromosome, complete genome | 3e-30 | 141 | BLASTN svg | BLASTP svg |
NC_004668:3156247* | 3156247 | 3181794 | 25548 | Enterococcus faecalis V583, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_014106:54587* | 54587 | 78533 | 23947 | Lactobacillus crispatus ST1, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_010080:69000* | 69000 | 94859 | 25860 | Lactobacillus helveticus DPC 4571, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_011567:1* | 1 | 39725 | 39725 | Anoxybacillus flavithermus WK1, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_020075:637420 | 637420 | 657371 | 19952 | Candidatus Blochmannia chromaiodes str. 640, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014727:95875* | 95875 | 118602 | 22728 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008054:245184 | 245184 | 268151 | 22968 | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014914:1327245 | 1327245 | 1350922 | 23678 | Taylorella equigenitalis MCE9 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018697:618832 | 618832 | 643385 | 24554 | Cycloclasticus sp. P1 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008497:79144* | 79144 | 97099 | 17956 | Lactobacillus brevis ATCC 367, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_005126:3204980 | 3204980 | 3227484 | 22505 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005362:1954443 | 1954443 | 1975589 | 21147 | Lactobacillus johnsonii NCC 533, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019978:39000* | 39000 | 58384 | 19385 | Halobacteroides halobius DSM 5150, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007292:623765* | 623765 | 657726 | 33962 | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015958:677500* | 677500 | 695452 | 17953 | Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_015275:3594890* | 3594890 | 3635887 | 40998 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_007503:1047577 | 1047577 | 1070253 | 22677 | Carboxydothermus hydrogenoformans Z-2901, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |