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Query: NC_005362:52848 Lactobacillus johnsonii NCC 533, complete genome

Start: 52848, End: 73398, Length: 20551

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015602:1810500*1810500183260222103Lactobacillus kefiranofaciens ZW3 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
NC_014724:59000*590008067321674Lactobacillus amylovorus GRL 1112 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
NC_015214:48999*489997018721189Lactobacillus acidophilus 30SC chromosome, complete genome6e-47196BLASTN svgBLASTP svg
NC_006814:51500*515007926227763Lactobacillus acidophilus NCFM, complete genome2e-44188BLASTN svgBLASTP svg
NC_018528:65000*650009177626777Lactobacillus helveticus R0052 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome1e-23119BLASTN svgBLASTP svg
NC_014106:54587*545877853323947Lactobacillus crispatus ST1, complete genome2e-22115BLASTN svgBLASTP svg
NC_010080:69000*690009485925860Lactobacillus helveticus DPC 4571, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020075:63742063742065737119952Candidatus Blochmannia chromaiodes str. 640, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014727:95875*9587511860222728Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,3e-0971.9BLASTN svgBLASTP svg
NC_008054:24518424518426815122968Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete4e-0867.9BLASTN svgBLASTP svg
NC_014914:13272451327245135092223678Taylorella equigenitalis MCE9 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018697:61883261883264338524554Cycloclasticus sp. P1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:79144*791449709917956Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005126:32049803204980322748422505Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005362:19544431954443197558921147Lactobacillus johnsonii NCC 533, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019978:39000*390005838419385Halobacteroides halobius DSM 5150, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007292:623765*62376565772633962Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015958:677500*67750069545217953Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_015275:3594890*3594890363588740998Clostridium lentocellum DSM 5427 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_007503:10475771047577107025322677Carboxydothermus hydrogenoformans Z-2901, complete genome1e-0560BLASTN svgBLASTP svg