Pre_GI: BLASTN Hits

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Query: NC_004557:2677155 Clostridium tetani E88, complete genome

Start: 2677155, End: 2703882, Length: 26728

Host Lineage: Clostridium tetani; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a virulent nonsporulating variant of strain Massachusetts used in vaccine production. Causes tetanus. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism causes tetanus (lockjaw) in humans. At the tissue level, the bacterium then releases an exotoxin called tetanospasmin that causes certain nervous system irregularities by means of retrograde tramsmission through neurons to the brain. If nervous impulses cannot be checked by normal inhibitory mechanisms, it produces the generalized muscular spasms characteristic of tetanus.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008593:1797000*1797000182201325014Clostridium novyi NT, complete genome3e-77297BLASTN svgBLASTP svg
NC_014328:4387303*4387303445852771225Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_010520:37538753753875377298819114Clostridium botulinum A3 str. Loch Maree, complete genome5e-42180BLASTN svgBLASTP svg
NC_012563:39218593921859394111319255Clostridium botulinum A2 str. Kyoto, complete genome1e-39172BLASTN svgBLASTP svg
NC_010516:37243123724312374347419163Clostridium botulinum B1 str. Okra, complete genome3e-37165BLASTN svgBLASTP svg
NC_019978:39000*390005838419385Halobacteroides halobius DSM 5150, complete genome1e-30143BLASTN svgBLASTP svg
NC_010723:29895429895431770918756Clostridium botulinum E3 str. Alaska E43, complete genome2e-26129BLASTN svgBLASTP svg
NC_015958:2206032*2206032223846032429Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_003454:20807052080705210460123897Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete2e-19105BLASTN svgBLASTP svg
NC_009089:117980*11798016311645137Clostridium difficile 630, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_015555:38600038600040434618347Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete9e-1693.7BLASTN svgBLASTP svg
NC_010718:237962*23796226062622665Natranaerobius thermophilus JW/NM-WN-LF, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015499:491423*49142351900327581Thermodesulfobium narugense DSM 14796 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014538:19425001942500196030417805Thermoanaerobacter sp. X513 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015638:31132533113253313625323001Lacinutrix sp. 5H-3-7-4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003869:20990002099000211791718918Thermoanaerobacter tengcongensis MB4, complete genome3e-0661.9BLASTN svgBLASTP svg