Pre_GI: BLASTN Hits

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Query: NC_002976:1540794 Staphylococcus epidermidis RP62A, complete genome

Start: 1540794, End: 1561138, Length: 20345

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Highly resistant to many antibiotics including penicillins and cephalosporins.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020164:88751088751091047422965Staphylococcus warneri SG1, complete genome01179BLASTN svgBLASTP svg
NC_000964:64978164978166954019760Bacillus subtilis subsp. subtilis str. 168, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010723:37174137174139352221782Clostridium botulinum E3 str. Alaska E43, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010674:37062937062939810727479Clostridium botulinum B str. Eklund 17B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_019978:31534631534633383318488Halobacteroides halobius DSM 5150, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020272:3325000*3325000334759922600Bacillus amyloliquefaciens IT-45, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020134:2832857*2832857285642223566Clostridium stercorarium subsp. stercorarium DSM 8532, complete4e-0867.9BLASTN svgBLASTP svg
NC_014393:36509573650957366964218686Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012968:43553243553246033724806Methylotenera mobilis JLW8, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012563:37298173729817376659036774Clostridium botulinum A2 str. Kyoto, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_004557:25524182552418257431921902Clostridium tetani E88, complete genome2e-0661.9BLASTN svgBLASTP svg