Query: NC_002620:936869 Chlamydia muridarum Nigg, complete genome
Start: 936869, End: 956364, Length: 19496
Host Lineage: Chlamydia muridarum; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria
General Information: This is a wild-type strain that is virulent in mice. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This organism causes pneumonitis (inflammation of lung tissue) in the mouse animal model and is used as a model organism to study pathogenesis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015744:900000* | 900000 | 922180 | 22181 | Chlamydia trachomatis L2c chromosome, complete genome | 0 | 13890 | BLASTN svg | BLASTP svg |
| NC_010287:899945* | 899945 | 922711 | 22767 | Chlamydia trachomatis 434/Bu, complete genome | 0 | 13890 | BLASTN svg | BLASTP svg |
| NC_010280:899974* | 899974 | 922739 | 22766 | Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome | 0 | 13870 | BLASTN svg | BLASTP svg |
| NC_007429:585774* | 585774 | 605935 | 20162 | Chlamydia trachomatis A/HAR-13, complete genome | 0 | 13820 | BLASTN svg | BLASTP svg |
| NC_000117:581987* | 581987 | 604115 | 22129 | Chlamydia trachomatis D/UW-3/CX, complete genome | 0 | 13810 | BLASTN svg | BLASTP svg |
| NC_015408:404778* | 404778 | 430321 | 25544 | Chlamydophila pecorum E58 chromosome, complete genome | 9e-77 | 295 | BLASTN svg | BLASTP svg |
| NC_005861:544280* | 544280 | 564099 | 19820 | Candidatus Protochlamydia amoebophila UWE25, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_004545:499709* | 499709 | 529218 | 29510 | Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014829:133305* | 133305 | 175007 | 41703 | Bacillus cellulosilyticus DSM 2522 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010842:2035146* | 2035146 | 2055990 | 20845 | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010602:2029757* | 2029757 | 2050601 | 20845 | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_012039:53497* | 53497 | 72030 | 18534 | Campylobacter lari RM2100, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014014:117925* | 117925 | 144543 | 26619 | Mycoplasma crocodyli MP145 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_019815:589762* | 589762 | 631684 | 41923 | Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015713:2193610* | 2193610 | 2216145 | 22536 | Simkania negevensis Z chromosome gsn.131, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015185:174847* | 174847 | 193438 | 18592 | Desulfurobacterium thermolithotrophum DSM 11699 chromosome, | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011999:198769* | 198769 | 220257 | 21489 | Macrococcus caseolyticus JCSC5402, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008555:2597980* | 2597980 | 2620824 | 22845 | Listeria welshimeri serovar 6b str. SLCC5334, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009802:1886000* | 1886000 | 1908099 | 22100 | Campylobacter concisus 13826, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014925:1970500* | 1970500 | 1989853 | 19354 | Staphylococcus pseudintermedius HKU10-03 chromosome, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015921:481532* | 481532 | 501621 | 20090 | Borrelia bissettii DN127 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_013192:232778* | 232778 | 282993 | 50216 | Leptotrichia buccalis DSM 1135, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009840:1485383* | 1485383 | 1562805 | 77423 | Prochlorococcus marinus str. MIT 9215, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009718:1207360* | 1207360 | 1238011 | 30652 | Fervidobacterium nodosum Rt17-B1, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_008816:1476209* | 1476209 | 1511847 | 35639 | Prochlorococcus marinus str. AS9601, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_007205:1059684* | 1059684 | 1087834 | 28151 | Candidatus Pelagibacter ubique HTCC1062, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |