Pre_GI Gene

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Host: NC_015744 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015744:900000 Chlamydia trachomatis L2c chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain was isolated from a man with severe proctitis. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
900255901121867hypothetical proteinBLASTP
9011329021361005glyceraldehyde-3-phosphate dehydrogenase type IQuickGO ontologyBLASTP
902180902548369ribosomal protein L17QuickGO ontologyBLASTP
9026149036871074DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
90376890416639930S ribosomal protein S11QuickGO ontologyBLASTP
90418890455636930S ribosomal protein S13QuickGO ontologyBLASTP
9046129059851374preprotein translocase SecY subunitQuickGO ontologyBLASTP
906008906442435ribosomal protein L15QuickGO ontologyBLASTP
906435906932498ribosomal protein S5QuickGO ontologyBLASTP
906947907318372ribosomal protein L18QuickGO ontologyBLASTP
907340907891552ribosomal protein L6QuickGO ontologyBLASTP
90791990832040230S ribosomal protein S8QuickGO ontologyBLASTP
90833890888054350S ribosomal protein L5QuickGO ontologyBLASTP
908882909178297ribosomal protein L24QuickGO ontologyBLASTP
909230909598369ribosomal protein L14QuickGO ontologyBLASTP
90961590986625230S ribosomal protein S17QuickGO ontologyBLASTP
909859910077219ribosomal protein L29QuickGO ontologyBLASTP
910079910495417ribosomal protein L16QuickGO ontologyBLASTP
910528911202675ribosomal protein S3QuickGO ontologyBLASTP
911212911547336ribosomal protein L22QuickGO ontologyBLASTP
911566911769204ribosomal protein S19QuickGO ontologyBLASTP
911838912692855ribosomal protein L2QuickGO ontologyBLASTP
91271691305133650S ribosomal protein L23QuickGO ontologyBLASTP
91306791373566950S ribosomal protein L4QuickGO ontologyBLASTP
91374491440966650S ribosomal protein L3QuickGO ontologyBLASTP
914738914875138hypothetical protein
914844915740897hypothetical proteinBLASTP
915906916856951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
916846917688843acyl-acyl-carrier-protein-UDP-N- acetylglucosamine O-acyltransferaseQuickGO ontologyBLASTP
917700918161462beta-hydroxyacyl-acyl-carrier-protein dehydratase FabZQuickGO ontologyBLASTP
918158919018861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
9191189206981581apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
920810921292483thioesterase superfamily proteinQuickGO ontologyBLASTP
921428922180753exonuclease DNA polymerase III epsilon subunit family domain proteinQuickGO ontologyBLASTP