Pre_GI: BLASTN Hits

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Query: NC_002516:2306776 Pseudomonas aeruginosa PAO1, complete genome

Start: 2306776, End: 2327287, Length: 20512

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:4311873*4311873433434022468Pseudomonas putida W619, complete genome5e-103383BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome6e-41176BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome6e-41176BLASTN svgBLASTP svg
NC_015711:72654397265439729106325625Myxococcus fulvus HW-1 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-29139BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome5e-26127BLASTN svgBLASTP svg
NC_009512:27820002782000280421822219Pseudomonas putida F1, complete genome1e-20109BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012560:1677798*1677798170247824681Azotobacter vinelandii DJ, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_021150:1677811*1677811170249124681Azotobacter vinelandii CA6, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-1281.8BLASTN svgBLASTP svg
NC_007614:16628741662874168304820175Nitrosospira multiformis ATCC 25196 chromosome 1, complete4e-1177.8BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007677:32400032400035159927600Salinibacter ruber DSM 13855, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009142:6199326*6199326625640657081Saccharopolyspora erythraea NRRL 2338, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014315:27870892787089281864431556Nitrosococcus watsoni C-113 chromosome, complete genome1e-0560BLASTN svgBLASTP svg