Pre_GI: BLASTP Hits

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Query: NC_018000:2964500:2969312 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 2969312, End: 2969749, Length: 438

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011901:1398376:141724714172471417669423Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completePilT protein domain-containing protein4e-39159
NC_015942:1711026:171449517144951714905411Acidithiobacillus ferrivorans SS3 chromosome, complete genomePilT protein domain-containing protein2e-38157
NC_005125:4557889:457538145753814575791411Gloeobacter violaceus PCC 7421, complete genomevirulence-associated protein VapC homolog3e-36150
NC_011761:2344408:235943323594332359819387Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completePIN domain-containing protein2e-34144
NC_015382:266000:274647274647275057411Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencePIN domain protein2e-33141
NC_011206:2239109:225417922541792254520342Acidithiobacillus ferrooxidans ATCC 53993, complete genomePilT protein domain protein2e-28124
NC_010995:4297361:431397843139784314382405Cellvibrio japonicus Ueda107, complete genomePIN (PilT N terminus) domain2e-22104
NC_013205:644914:649702649702650109408Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,PilT protein domain protein1e-21102
NC_015581:1043394:105384510538451054243399Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomePilT protein domain-containing protein2e-2098.2
NC_010278:1918000:192941819294181929816399Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,nucleic acid-binding protein2e-2097.8
NC_009053:1942973:196811919681191968505387Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-1994
NC_010939:1986263:199298919929891993387399Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein3e-1993.6
NC_008789:835909:877016877016877303288Halorhodospira halophila SL1, complete genomePilT protein-like protein4e-1993.6
NC_015740:2407500:242307824230782423482405Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-1992.8
NC_012660:5242392:525619252561925256599408Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-1992.4
NC_004851:191709:198117198117198515399Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceplasmid maintenance protein7e-1992.4
NC_017319:192482:198045198045198443399Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceplasmid maintenance protein7e-1992.4
NC_007507:101887:111429111429111830402Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,hypothetical protein2e-1890.9
NC_014228:4408500:442340844234084423797390Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (with PilT protein domain)3e-1890.9
NC_016832:3020000:302593530259353026333399Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,PilT protein domain protein3e-1890.5
NC_004631:3030580:303729530372953037693399Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-1890.5
NC_003198:3042000:305138830513883051786399Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein (assiciated with virulence)3e-1890.5
NC_006513:881120:901787901787902134348Azoarcus sp. EbN1, complete genomeconserved hypothetical protein, similar to virulence-associated protein VapC8e-1889
NC_015578:61820:691206912069557438Treponema primitia ZAS-2 chromosome, complete genomeputative virulence-associated protein1e-1788.2
NC_013862:27991:626862686675408Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencePilT protein domain protein2e-1787.8
NC_015578:3980496:401721640172164017653438Treponema primitia ZAS-2 chromosome, complete genomevirulence associated protein C4e-1786.7
NC_002939:2697767:271099627109962711397402Geobacter sulfurreducens PCA, complete genomevirulence associated protein C4e-1786.7
NC_012912:4167429:417212441721244172528405Dickeya zeae Ech1591, complete genomePilT protein domain protein8e-1785.9
NC_016860:3995445:401015640101564010572417Salmonella enterica subsp. enterica serovar Typhimurium strVagD3e-1684
NC_011662:1160887:116418911641891164608420Thauera sp. MZ1T, complete genomePilT protein domain protein6e-1682.8
NC_012731:3411161:343273634327363433152417Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative DNA binding protein1e-1582
NC_013285:1:177271772718143417Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein1e-1581.6
NC_014722:1191380:120180312018031202216414Burkholderia rhizoxinica HKI 454, complete genomeVIRULENCE-ASSOCIATED PROTEIN C2e-1581.3
NC_010831:40000:577155771558161447Chlorobium phaeobacteroides BS1, complete genomePilT protein domain protein2e-1580.9
NC_012751:409333:428549428549428965417Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module, PIN domain protein6e-1579.7
NC_017098:32196:503285032850723396Spirochaeta africana DSM 8902 chromosome, complete genomeputative nucleic acid-binding protein, contains PIN domain5e-1476.6
NC_013889:1623697:163398116339811634379399Thioalkalivibrio sp. K90mix chromosome, complete genomePilT protein domain protein6e-1476.3
NC_019902:1:138671386714271405Thioalkalivibrio nitratireducens DSM 14787, complete genomeVapC toxin protein2e-1374.7
NC_010602:2244729:232456623245662324964399Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'PilT protein2e-1374.3
NC_010842:2310756:232995223299522330350399Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeVapC-like nucleic acid-binding protein2e-1374.3
NC_012560:3667177:368595936859593686369411Azotobacter vinelandii DJ, complete genomePilT domain-containing protein4e-1373.6
NC_021150:3667176:368595836859583686368411Azotobacter vinelandii CA6, complete genomePilT domain-containing protein4e-1373.6
NC_012751:942315:953691953691954098408Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module,PIN domain protein4e-1270.1
NC_015942:2213710:222199022219902222394405Acidithiobacillus ferrivorans SS3 chromosome, complete genomePilT protein domain-containing protein1e-1065.5
NC_013161:4093322:410215241021524102553402Cyanothece sp. PCC 8802, complete genomePilT protein domain protein1e-1065.1
NC_017276:774690:780110780110780502393Sulfolobus islandicus REY15A chromosome, complete genomeVapC-type toxin1e-1065.1
NC_009615:4425500:445163544516354452045411Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA binding protein2e-1064.7
NC_017059:1727095:173726917372691737694426Rhodospirillum photometricum DSM 122, complete genomePutative plasmid stability-like protein2e-1064.3
NC_013730:4811911:482453148245314824944414Spirosoma linguale DSM 74, complete genomePilT protein domain protein3e-0857.4
NC_019902:1061432:109048510904851090715231Thioalkalivibrio nitratireducens DSM 14787, complete genome2e-0754.7
NC_010831:2078329:211296121129612113386426Chlorobium phaeobacteroides BS1, complete genomePilT protein domain protein3e-0753.9
NC_015510:2487617:249169624916962492112417Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomePilT protein domain-containing protein4e-0753.5
NC_000914:198000:198297198297198719423Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceY4jK7e-0752.8
NC_012752:1:789078908285396Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative addiction module, PIN domain protein2e-0651.6
NC_009511:2921448:294077129407712941145375Sphingomonas wittichii RW1 chromosome, complete genomePilT domain-containing protein4e-0650.4
NC_006576:2683467:202620262481456Synechococcus elongatus PCC 6301, complete genomesimilar to plasmid stabilization protein StbB homolog9e-0648.9
NC_007604:1586243:160105616010561601511456Synechococcus elongatus PCC 7942, complete genomeplasmid stabilization protein StbB-like9e-0648.9