Pre_GI: BLASTP Hits

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Query: NC_017986:2548720:2556613 Pseudomonas putida ND6 chromosome, complete genome

Start: 2556613, End: 2557842, Length: 1230

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006350:595893:6374336374336386111179Burkholderia pseudomallei K96243 chromosome 1, complete sequencephage integrase family protein9e-21101
NC_004603:3080614:3098708309870830999791272Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein5e-1685.9
NC_010571:2943369:2950545295054529517831239Opitutus terrae PB90-1, complete genomeintegrase family protein2e-1584
NC_014752:834616:874228874228875190963Neisseria lactamica ST-640, complete genomehypothetical protein2e-1583.6
NC_003919:3396136:3409969340996934112881320Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase/recombinase6e-1479
NC_005773:3220500:3232787323278732339951209Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH05, site-specific recombinase, phage integrase family6e-1479
NC_014366:478000:4841234841234853041182Gamma proteobacterium HdN1, complete genomephage integrase6e-1375.5
NC_020209:1949500:1955255195525519565081254Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase, phage integrase family protein7e-1375.5
NC_004129:3452885:3461943346194334631661224Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family8e-1375.5
NC_004578:5192110:5195601519560151968661266Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family3e-1273.6
NC_013008:3525428:3556173355617335573781206Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-1273.6
NC_002695:3468873:3497212349721234984171206Escherichia coli O157:H7 str. Sakai, complete genomeputative site specific recombinase2e-1273.6
NC_011353:3573641:3601448360144836026531206Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-1273.6
NC_013941:3300000:3334944333494433361491206Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesite specific recombinase2e-1273.6
NC_013421:1819036:1849485184948518506901206Pectobacterium wasabiae WPP163, complete genomeintegrase family protein7e-1272
NC_020829:940692:9915479915479928121266Pseudomonas denitrificans ATCC 13867, complete genomephage integrase family site specific recombinase1e-1171.2
NC_011283:4438500:4462553446255344637581206Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase2e-1170.9
NC_005773:4282840:429044642904464291432987Pseudomonas syringae pv. phaseolicola 1448A, complete genomePhage integrase family domain protein5e-1169.3
NC_015726:406450:4141604141604153561197Cupriavidus necator N-1 chromosome 1, complete sequencetyrosine-based site-specific recombinase CMGI-77e-1168.6
NC_005773:4899252:4901655490165549029171263Pseudomonas syringae pv. phaseolicola 1448A, complete genomesite-specific recombinase, phage integrase family2e-1067.4
NC_014640:6815264:6840529684052968417851257Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1067
NC_012917:1840172:1850685185068518518751191Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein2e-1067
NC_010067:191190:2005492005492016041056Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1066.6
NC_010322:583842:5894255894255907111287Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein1e-0964.3
NC_014311:3076519:3117128311712831183451218Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase1e-0964.3
NC_009792:3665369:3688867368886736899851119Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0963.5
NC_016514:3573400:3598096359809635993641269Enterobacter cloacae EcWSU1 chromosome, complete genometyrosine recombinase XerD4e-0962.8
NC_009436:3117661:3144337314433731455391203Enterobacter sp. 638, complete genomephage integrase family protein5e-0962.8
NC_008800:1090000:1099313109931311005181206Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase7e-0962
NC_007510:1959883:2015945201594520170631119Burkholderia sp. 383 chromosome 1, complete sequencePhage integrase9e-0962
NC_008577:2604281:2607529260752926088511323Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein9e-0961.6
NC_009524:1369395:1381372138137213825621191Psychrobacter sp. PRwf-1 chromosome, complete genomephage integrase family protein2e-0860.8
NC_011663:674069:6764326764326777541323Shewanella baltica OS223 chromosome, complete genomeintegrase family protein4e-0859.7
NC_009665:639914:6422716422716435931323Shewanella baltica OS185 chromosome, complete genomephage integrase family protein4e-0859.7
NC_008740:2563278:2581229258122925825151287Marinobacter aquaeolei VT8, complete genomephage integrase family protein7e-0858.9
NC_015563:2018038:2032460203246020336111152Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein9e-0858.5
NC_019897:2004050:202539420253942026296903Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD8e-0858.5
NC_020829:636773:6418616418616431711311Pseudomonas denitrificans ATCC 13867, complete genomeintegrase2e-0757.4
NC_015458:2998000:3009145300914530104251281Pusillimonas sp. T7-7 chromosome, complete genomeintegrase family protein2e-0757.4
NC_002655:3538656:3564664356466435657071044Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-0757
NC_014168:1963129:198457419845741985488915Segniliparus rotundus DSM 44985 chromosome, complete genomeintegrase family protein3e-0756.6
NC_016816:1545354:1558942155894215601501209Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family3e-0756.6
NC_014562:2563466:259475725947572595506750Pantoea vagans C9-1 chromosome, complete genomeTyrosine recombinase xerD5e-0755.8
NC_013521:2193203:221540622154062216359954Sanguibacter keddieii DSM 10542, complete genometyrosine recombinase XerD3e-0653.5
NC_011741:4570498:4581350458135045825521203Escherichia coli IAI1 chromosome, complete genomeputative integrase7e-0652.4
CU928160:4570498:4581350458135045825521203Escherichia coli IAI1 chromosome, complete genomeputative integrase7e-0652.4