Pre_GI: BLASTP Hits

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Query: NC_017986:1042642:1053283 Pseudomonas putida ND6 chromosome, complete genome

Start: 1053283, End: 1057128, Length: 3846

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:4287605:4295234429523442990793846Pseudomonas putida F1, complete genomeYD repeat-containing protein02623
NC_016830:5109953:5116855511685551215794725Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein0965
NC_010322:1623599:1638966163896616429043939Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein0822
NC_015733:1680500:1685350168535016891323783Pseudomonas putida S16 chromosome, complete genomeYD repeat/RHS repeat-containing protein0815
NC_009512:4287605:4307156430715643123275172Pseudomonas putida F1, complete genomeYD repeat protein0717
NC_016830:5109953:5131208513120851361844977Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein0691
NC_010322:1623599:1627462162746216325315070Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein1e-150535
NC_010501:1629107:1634063163406316390394977Pseudomonas putida W619, complete genomeYD repeat protein8e-145515
NC_010694:614985:6149856149856199614977Erwinia tasmaniensis, complete genomeSimilar to Nematicidal protein 26e-113409
NC_014228:1712339:1716790171679017217544965Xenorhabdus nematophila ATCC 19061, complete genomeputative Nematicidal protein 25e-103377
NC_013892:2108175:2155453215545321598414389Xenorhabdus bovienii SS-2004 chromosome, complete genomeNematicidal protein 24e-89330
NC_010067:4418000:4427234442723444311303897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-86319
NC_012214:3502992:3519126351912635240904965Erwinia pyrifoliae Ep1/96, complete genomeNematicidal protein4e-69264
NC_009668:46010:5085650856559525097Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceYD repeat-containing protein2e-41172
NC_013971:1283942:1297034129703413021245091Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein6e-40167
NC_013961:1246454:1259504125950412645945091Erwinia amylovora, complete genomeTeneurin-16e-40167
NC_009783:1665610:1681367168136716860464680Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-36155
NC_010506:4951500:4969347496934749731503804Shewanella woodyi ATCC 51908, complete genomeYD repeat protein1e-22109
NC_012214:2673058:2679038267903826841285091Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 26e-22107
NC_010694:2565580:2576972257697225820625091Erwinia tasmaniensis, complete genomeNematicidal protein 26e-1997.4
NC_010694:2565580:2571660257166025767505091Erwinia tasmaniensis, complete genomeSimilar to the nematicidal protein 21e-1896.3
NC_015733:1680500:1684093168409316853251233Pseudomonas putida S16 chromosome, complete genomeYD repeat-containing protein9e-1893.6
NC_004578:5623783:5636765563676556417745010Pseudomonas syringae pv. tomato str. DC3000, complete genomeYD repeat protein4e-1688.2
NC_012214:2673058:2684270268427026893635094Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 21e-1380.1
NC_011899:1969187:1983804198380419906376834Halothermothrix orenii H 168, complete genomeYD repeat protein7e-1377.4
NC_013961:1246454:1254272125427212593655094Erwinia amylovora, complete genomeProtein rhsC precursor1e-1276.6
NC_013971:1283942:1291766129176612968955130Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein1e-1276.3
NC_012034:6469:1264412644217279084Anaerocellum thermophilum DSM 6725, complete genomeYD repeat protein1e-1276.3
NC_014720:4170:1290912909218938985Caldicellulosiruptor kronotskyensis 2002 chromosome, completeyd repeat protein4e-1274.7
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein5e-1067.8
NC_014392:355443:3600883600883675987511Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome6e-1067.8
NC_012034:390273:3950643950644011716108Anaerocellum thermophilum DSM 6725, complete genomeYD repeat-containing protein1e-0966.6
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein5e-0964.7
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein2e-0862.4
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein7e-0860.5
NC_009615:3638451:3644261364426136504316171Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-0759.7
NC_014363:1732417:1745909174590917506274719Olsenella uli DSM 7084 chromosome, complete genomeYD repeat protein1e-0656.2
NC_016582:6509792:6515356651535665198344479Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRhs protein2e-0656.2
NC_018691:2254566:2273435227343522807487314Alcanivorax dieselolei B5 chromosome, complete genomeYD repeat protein2e-0655.8
NC_011660:2756860:2769137276913727758056669Listeria monocytogenes HCC23 chromosome, complete genomeYD repeat protein2e-0655.8
NC_019940:1932906:1941658194165819458364179Thioflavicoccus mobilis 8321 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0655.5
NC_020209:4643901:4648647464864746530204374Pseudomonas poae RE*1-1-14, complete genomehypothetical protein4e-0655.1
NC_012491:4692667:4705828470582847094093582Brevibacillus brevis NBRC 100599, complete genomehypothetical protein4e-0654.7
NC_019892:429975:4299754299754371207146Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRHS repeat-associated core domain-containing protein6e-0654.3
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein6e-0654.3