Pre_GI: BLASTP Hits

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Query: NC_017265:2306500:2312637 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2312637, End: 2313713, Length: 1077

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:3535786:3536694353669435377701077Yersinia pestis A1122 chromosome, complete genomehypothetical protein0743
NC_017160:2414000:2414015241401524150911077Yersinia pestis D182038 chromosome, complete genomehypothetical protein0743
NC_004088:2691565:2692473269247326935491077Yersinia pestis KIM, complete genomehypothetical protein0743
NC_008149:2517538:2527618252761825286941077Yersinia pestis Nepal516, complete genomehypothetical protein0743
NC_005810:1663672:1664918166491816659941077Yersinia pestis biovar Microtus str. 91001, complete genome0743
NC_015224:2095816:2096172209617220972331062Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein0652
NC_014006:850763:8976638976638987541092Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein3e-80298
NC_015152:2549756:2573316257331625743981083Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein1e-28127
NC_011881:1:154461544616372927Arthrobacter chlorophenolicus A6 plasmid pACHL02, completehypothetical protein1e-22107
NC_021172:3655206:368838536883853688981597Hyphomicrobium denitrificans 1NES1, complete genomehypothetical protein4e-1479.3