Pre_GI: BLASTP Hits

Some Help

Query: NC_017249:7993713:8100000 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8100000, End: 8100398, Length: 399

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2158116:217841921784192179081663Bradyrhizobium japonicum USDA 110, complete genomesimilar to ABC transporter, amino acid binding protein1e-70264
NC_011001:2517159:2520322252032225214401119Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter solute binding protein1e-2098.6
NC_011666:2259447:2259447225944722605651119Methylocella silvestris BL2, complete genomeExtracellular ligand-binding receptor1e-2098.2
NC_007511:719493:7310787310787322771200Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein1e-2098.2
NC_010515:2358134:2372033237203323731511119Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-2098.2
NC_008543:2035292:2037685203768520388031119Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-2098.2
NC_008061:428501:4408634408634419811119Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-2098.2
NC_010552:2089140:2092992209299220941101119Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-2098.2
NC_016745:675909:6971166971166982011086Oceanimonas sp. GK1 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein LivK6e-2095.9
NC_021066:1393750:1411247141124714123621116Raoultella ornithinolytica B6, complete genomeextracellular ligand-binding receptor1e-1995.1
NC_005773:694990:6977246977246988601137Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein6e-1992.8
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor8e-1992.4
NC_011742:3799788:3807332380733238084351104Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily2e-1890.9
NC_007946:3855445:3859797385979738609571161Escherichia coli UTI89, complete genomeLeu/Ile/Val-binding protein precursor2e-1890.9
NC_008563:3888232:3892584389258438937441161Escherichia coli APEC O1, complete genomeLeu/Ile/Val-binding protein precursor2e-1890.9
NC_015556:819503:8310258310258321461122Pseudomonas fulva 12-X chromosome, complete genomeExtracellular ligand-binding receptor4e-1890.1
NC_007946:3855445:3857693385769338588561164Escherichia coli UTI89, complete genomeleucine-specific binding protein precursor8e-1889
NC_008563:3888232:3890480389048038915891110Escherichia coli APEC O1, complete genomeleucine transporter subunit1e-1788.6
NC_011742:3799788:3805228380522838063371110Escherichia coli S88 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein1e-1788.6
NC_010511:5169338:5171493517149351725931101Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor5e-1683.2
NC_015224:279037:2812912812912825471257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched-chain amino acid-binding protein1e-1581.6
NC_003296:1980687:1996311199631119974531143Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE LEUCINE-SPECIFIC BINDING PRECURSOR TRANSMEMBRANE PROTEIN2e-1374.3
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein5e-1373.2
NC_010552:335989:3383023383023394531152Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-1373.2
NC_008543:323773:3252703252703264301161Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-1271.2
NC_009255:1105786:1143156114315611443041149Burkholderia vietnamiensis G4 chromosome 2, complete sequenceextracellular ligand-binding receptor5e-1166.6
NC_010086:1816378:1879383187938318805311149Burkholderia multivorans ATCC 17616 chromosome 2, completeExtracellular ligand-binding receptor5e-1166.6
NC_010805:575709:5947735947735959211149Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system substrate-binding protein5e-1166.6
NC_010557:679656:6890646890646901731110Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceExtracellular ligand-binding receptor6e-1166.2
NC_008702:4064470:4084668408466840857921125Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein2e-1064.3
NC_012791:2233098:2243498224349822446401143Variovorax paradoxus S110 chromosome 1, complete genomeExtracellular ligand-binding receptor4e-1063.5
NC_008702:4064470:4086174408617440872891116Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein4e-1063.5
NC_008825:2063990:2076133207613320772601128Methylibium petroleiphilum PM1, complete genomeputative secreted substrate binding protein6e-1062.8
NC_013895:1282566:1295398129539812965551158Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completereceptor family ligand-binding protein7e-0959.3
NC_015138:2025000:2036773203677320379121140Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor1e-0858.9
NC_010681:74587:7995179951811291179Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor1e-0858.9
NC_010681:1234500:1249047124904712502101164Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor2e-0857.8
NC_016002:2652500:2665852266585226670001149Pseudogulbenkiania sp. NH8B, complete genomeextracellular ligand-binding receptor2e-0857.8
NC_010676:2658495:2672337267233726734791143Burkholderia phytofirmans PsJN chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-0754.7
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor3e-0753.5
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor5e-0753.1
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein8e-0752.4
NC_011060:2099255:2114243211424321153641122Pelodictyon phaeoclathratiforme BU-1, complete genomeExtracellular ligand-binding receptor3e-0650.4
NC_008751:2774000:2794966279496627960841119Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeExtracellular ligand-binding receptor3e-0650.4
NC_002937:614000:6169966169966181141119Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein3e-0650.4