Pre_GI: BLASTP Hits

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Query: NC_017249:3267500:3286552 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3286552, End: 3287565, Length: 1014

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012982:2730000:274518827451882746102915Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family1e-1480.9
NC_012982:2730000:2747571274757127498862316Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family with acetamidase/formamidase activity3e-1479.7
NC_015723:430165:4573224573224596852364Cupriavidus necator N-1 chromosome 2, complete sequenceformamidase FmdR4e-1479
NC_012721:109500:1187871187871198211035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein3e-1376.3
NC_011000:2831183:284490528449052845858954Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein5e-1375.5
NC_007802:3807500:3819336381933638203491014Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family4e-1272.4
NC_017249:7341428:736198473619847362415432Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1170.9
NC_010501:3671517:3690878369087836920471170Pseudomonas putida W619, complete genometranscriptional regulator, AraC family3e-1169.7
NC_015138:201323:201323201323202261939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAraC family transcriptional regulator2e-1169.7
NC_010623:1961685:1973975197397519750391065Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-1169.3
NC_015259:734795:765291765291766247957Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator5e-1168.9
NC_013595:5282207:5286943528694352880041062Streptosporangium roseum DSM 43021, complete genomeAraC-type DNA-binding domain-containing protein- like protein7e-1168.6
NC_011757:517000:530059530059530844786Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family1e-1067.8
NC_014323:992978:1023696102369610247481053Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein1e-1067.4
NC_019940:3089884:310140831014083102406999Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-1067
NC_008268:7485710:749915374991537500100948Rhodococcus sp. RHA1, complete genometranscriptional regulator2e-1066.6
NC_013446:3209000:3211048321104832120641017Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family4e-1065.9
NC_015259:485015:5491645491645502431080Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, AraC family5e-1065.5
NC_007802:4071006:407474240747424075740999Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family6e-1065.5
NC_014931:3642779:364471236447123645674963Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family1e-0963.9
NC_015136:1101725:112277511227751123755981Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator2e-0963.9
NC_003888:8594500:860753986075398608480942Streptomyces coelicolor A3(2), complete genometranscriptional regulator2e-0963.9
NC_019897:1577015:161353316135331614366834Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator2e-0963.5
NC_014817:29795:520445204452934891Asticcacaulis excentricus CB 48 chromosome 2, complete sequencehelix-turn-helix, arac domain protein6e-0962
NC_014618:2788533:279390727939072794872966Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator8e-0961.6
NC_015690:1967244:2015425201542520164621038Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0860.5
NC_015519:1888917:1901250190125019028631614Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family two component transcriptional regulator2e-0860.5
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family2e-0860.1
NC_011283:1178500:118002211800221180375354Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator4e-0859.3
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein4e-0859.3
NC_015436:1287873:128864712886471289450804Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, AraC family7e-0858.5
NC_014153:2077647:209508320950832096024942Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, AraC family8e-0858.2
NC_009512:1025365:103132810313281032152825Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type9e-0858.2
NC_014323:992978:101159110115911012514924Herbaspirillum seropedicae SmR1 chromosome, complete genomenitrilase regulator protein2e-0756.6
NC_010505:1581429:158326015832601584234975Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AraC family3e-0756.2
NC_015947:4248536:4251342425134242524721131Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator3e-0756.2
NC_015703:4655488:4655488465548846566481161Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator5e-0755.5
NC_013595:8603188:8612964861296486139921029Streptosporangium roseum DSM 43021, complete genomeAraC family transcriptional regulator5e-0755.5
NC_020209:47504:523785237852890513Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator6e-0755.1
NC_013406:1217385:127150412715041272373870Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator1e-0654.7
NC_003155:883500:891284891284892279996Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator1e-0654.7
NC_015062:58826:588265882659182357Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceAraC family transcriptional regulator1e-0654.7
NC_021150:2348214:2371687237168723727331047Azotobacter vinelandii CA6, complete genomeTranscription activator in PHB biosynthesis, AraC family1e-0654.3
NC_012560:2348202:2371675237167523727211047Azotobacter vinelandii DJ, complete genomeTranscription activator in PHB biosynthesis, AraC family1e-0654.3
NC_007952:3196085:323128132312813232249969Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, AraC family1e-0654.3
NC_021066:5342127:534681253468125347165354Raoultella ornithinolytica B6, complete genomemultiple antibiotic resistance protein marA1e-0654.3
NC_006349:1630514:1646532164653216475931062Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, araC family1e-0653.9
NC_011983:508287:5273195273195284491131Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein1e-0653.9
NC_016935:4233223:4266322426632242686402319Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0653.9
NC_008835:2133696:213845321384532139445993Burkholderia mallei NCTC 10229 chromosome I, complete sequencetranscriptional regulator, araC family2e-0653.5
NC_009079:705931:710682710682711674993Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, araC family2e-0653.5
NC_016641:2773757:2773757277375727753491593Paenibacillus terrae HPL-003 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator4e-0652.8
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_003888:5443832:5452526545252654536231098Streptomyces coelicolor A3(2), complete genomearaC family regulatory protein5e-0652.4
NC_015259:485015:557853557853558812960Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator5e-0652
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator5e-0652
NC_015675:2567000:257997325799732580845873Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator6e-0652
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator7e-0652
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein9e-0651.2