Pre_GI: BLASTP Hits

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Query: NC_017219:1163000:1175995 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 1175995, End: 1176144, Length: 150

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011593:1163000:117597311759731176353381Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein2e-22104
NC_009089:3935500:396323639632363963619384Clostridium difficile 630, complete genomeconjugative transposon protein1e-1685.1
NC_009089:428075:452608452608452997390Clostridium difficile 630, complete genomeconjugative transposon protein3e-1270.5
NC_015977:2966971:298340629834062983789384Roseburia hominis A2-183 chromosome, complete genomeconjugative transposon protein2e-1064.7
NC_017179:4023139:402994340299434030326384Clostridium difficile BI1, complete genomeconjugative transposon protein2e-1064.3
NC_009089:581655:586031586031586417387Clostridium difficile 630, complete genomeconjugative transposon protein4e-0857
NC_013895:1332832:136865113686511369037387Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein8e-0855.8
NC_016630:1247251:126400612640061264389384Filifactor alocis ATCC 35896 chromosome, complete genomehypothetical protein3e-0753.9
NC_009089:3889811:390957939095793909956378Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein5e-0753.1