Pre_GI: BLASTP Hits

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Query: NC_016830:3697173:3716992 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3716992, End: 3717528, Length: 537

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:3175500:318930931893093189845537Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative bifunctional deaminase-reductase4e-89326
NC_008752:2334511:235544823554482355990543Acidovorax avenae subsp. citrulli AAC00-1, complete genomebifunctional deaminase-reductase domain protein8e-75279
NC_011751:3048490:307361930736193074158540Escherichia coli UMN026 chromosome, complete genomeputative Bifunctional deaminase-reductase3e-69260
NC_016514:1183356:120053712005371201076540Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YwjB4e-69260
NC_008313:1991000:199836819983681998904537Ralstonia eutropha H16 chromosome 1, complete sequencedihydrofolate reductase1e-68258
NC_009648:3224495:325335032533503253886537Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative bifunctional deaminase-reductase1e-68258
NC_008027:4953432:497552049755204976056537Pseudomonas entomophila L48, complete genomehypothetical protein3e-39160
NC_013169:513327:523889523889524479591Kytococcus sedentarius DSM 20547, complete genomedihydrofolate reductase1e-32139
NC_018750:3741581:376190037619003762442543Streptomyces venezuelae ATCC 10712, complete genomeDihydrofolate reductase5e-28124
NC_020829:1840281:186700618670061867551546Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein7e-27119
NC_014008:3500000:350030635003063500830525Coraliomargarita akajimensis DSM 45221 chromosome, complete genomebifunctional deaminase-reductase domain protein8e-25112
NC_013521:1619394:163905916390591639613555Sanguibacter keddieii DSM 10542, complete genomedihydrofolate reductase3e-24110
NC_019904:5130458:513478351347835135319537Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase2e-21102
NC_008255:1500067:150999815099981510528531Cytophaga hutchinsonii ATCC 33406, complete genomedihydrofolate reductase family protein1e-1995.5
NC_016641:2225779:223120622312062231748543Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-1994.7
NC_016940:3600749:362739336273933627923531Saprospira grandis str. Lewin chromosome, complete genomedihydrofolate reductase2e-1892
NC_006576:2423250:242412124241212424705585Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-1789
NC_007604:1875268:189234618923461892930585Synechococcus elongatus PCC 7942, complete genomehypothetical protein1e-1789
NC_014622:653599:658806658806659345540Paenibacillus polymyxa SC2 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein3e-1684.7
NC_008536:33776:383203832038874555Solibacter usitatus Ellin6076, complete genomebifunctional deaminase-reductase domain protein2e-1684.7
NC_014483:562594:567934567934568473540Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein4e-1684
NC_014976:2175667:218302321830232183589567Bacillus subtilis BSn5 chromosome, complete genomeputative oxidoreductase8e-1476.6
NC_020244:4020315:402831040283104028876567Bacillus subtilis XF-1, complete genomeputative oxidoreductase9e-1476.3
NC_013406:781308:796880796880797437558Paenibacillus sp. Y412MC10 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein1e-1375.9
NC_008255:3331613:333161333316133332158546Cytophaga hutchinsonii ATCC 33406, complete genomedihydrofolate reductase2e-1375.5
NC_000964:4164683:418563241856324186198567Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein7e-1373.6
NC_008525:1493317:150049515004951501028534Pediococcus pentosaceus ATCC 25745, complete genomeDihydrofolate reductase2e-1272
NC_020272:599064:615323615323615853531Bacillus amyloliquefaciens IT-45, complete genomedihydrofolate reductase family protein3e-1271.6
NC_014655:424486:451401451401451946546Leadbetterella byssophila DSM 17132 chromosome, complete genomebifunctional deaminase-reductase domain protein4e-1270.9
NC_013406:3672857:371669337166933717268576Paenibacillus sp. Y412MC10 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein1e-1169.7
NC_010520:3674883:368638136863813686902522Clostridium botulinum A3 str. Loch Maree, complete genomeriboflavin biosynthesis protein RibD C- domain protein6e-1167
NC_015930:821342:831948831948832469522Lactococcus garvieae ATCC 49156, complete genomehypothetical protein7e-1166.6
NC_007907:4956500:497695749769574977565609Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1065.9
NC_014623:9089998:909447190944719095040570Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRiboflavin biosynthesis protein RibD6e-1063.5
NC_012658:3678000:368092136809213681442522Clostridium botulinum Ba4 str. 657 chromosome, complete genomeriboflavin biosynthesis protein RibD C- domain-containing protein1e-0962.4
NC_011830:4234392:425093042509304251475546Desulfitobacterium hafniense DCB-2, complete genomebifunctional deaminase-reductase domain protein1e-0962.4
NC_010001:1702350:170420617042061704727522Clostridium phytofermentans ISDg, complete genomebifunctional deaminase-reductase domain protein4e-0961.2
NC_011146:3720658:372891237289123729475564Geobacter bemidjiensis Bem, complete genomebifunctional deaminase-reductase domain protein3e-0961.2
NC_013929:6526745:653395265339526534515564Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-0857.8
NC_012914:5194791:521846752184675219033567Paenibacillus sp. JDR-2, complete genomebifunctional deaminase-reductase domain protein3e-0857.8
NC_019904:1616742:163458716345871635147561Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase4e-0857.8
NC_015711:570910:589919589919590470552Myxococcus fulvus HW-1 chromosome, complete genomeriboflavin biosynthesis protein RibD domain-containing protein1e-0755.8
NC_009338:3410349:342734734273473427946600Mycobacterium gilvum PYR-GCK chromosome, complete genomedeaminase-reductase domain-containing protein2e-0755.5
NC_014391:6000834:600385760038576004420564Micromonospora aurantiaca ATCC 27029 chromosome, complete genomebifunctional deaminase-reductase domain-containing protein1e-0652.4
NC_013061:2775623:278462427846242785202579Pedobacter heparinus DSM 2366, complete genomebifunctional deaminase-reductase domain protein1e-0652.4
NC_018524:5066720:508351750835175084074558Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeribD C-terminal domain protein2e-0651.6
NC_014618:2705769:270900827090082709592585Enterobacter cloacae SCF1 chromosome, complete genomedeaminase/reductase domain-containing protein4e-0650.8
NC_019904:5130458:514303851430385143595558Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrofolate reductase5e-0650.8
NC_011832:1122268:113891711389171139480564Candidatus Methanosphaerula palustris E1-9c, complete genomeriboflavin biosynthesis protein RibD7e-0650.1