Pre_GI: BLASTP Hits

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Query: NC_015848:2684275:2691404 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2691404, End: 2691694, Length: 291

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:178051617805161780800285Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxI2e-40163
NC_012943:1769445:178062917806291780913285Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-40163
NC_009525:2635792:264420426442042644488285Mycobacterium tuberculosis H37Ra, complete genomeputative esat-6 like protein2e-40163
NC_016768:1769332:179030617903061790590285Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxO4e-38156
NC_012943:1769445:179041917904191790703285Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeesat-6 like protein esxO4e-38156
NC_009525:2635792:263579226357922636076285Mycobacterium tuberculosis H37Ra, complete genomeputative esat-6 like protein EsxO4e-38156
NC_010612:4501414:450710145071014507385285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_43e-37153
NC_010612:4501414:450921445092144509498285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_53e-37153
NC_016948:1074034:107656710765671076851285Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-36150
NC_017904:4742775:475334247533424753626285Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-35147
NC_010612:4400260:440066544006654400949285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_62e-31134
NC_012207:2573562:259575725957572595939183Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative EsaT-6 like protein 67e-25112
NC_011896:1380000:138034013803401380627288Mycobacterium leprae Br4923, complete genomehypothetical protein6e-2096.3
NC_002677:1380000:138030013803001380587288Mycobacterium leprae TN, complete genomehypothetical protein6e-2096.3