Pre_GI: BLASTP Hits

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Query: NC_015848:2381148:2400136 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2400136, End: 2400432, Length: 297

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007759:1028977:104255210425521042878327Syntrophus aciditrophicus SB, complete genometransposase1e-1994.7
NC_004463:1683000:168405616840561684367312Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-1994.7
NC_019940:866969:876956876956877246291Thioflavicoccus mobilis 8321 chromosome, complete genometransposase3e-1994
NC_004463:2262467:229391022939102294269360Bradyrhizobium japonicum USDA 110, complete genomeputative transposase4e-1993.2
NC_004463:1749000:176564817656481766007360Bradyrhizobium japonicum USDA 110, complete genomeputative transposase4e-1993.2
NC_004463:1898648:190692119069211907280360Bradyrhizobium japonicum USDA 110, complete genomeputative transposase5e-1993.2
NC_013194:1631134:166117616611761661481306Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS3/IS911 family protein1e-1892
NC_015376:3249773:325958332595833259891309Burkholderia gladioli BSR3 chromosome chromosome 2, completetransposase IS3/IS911 family protein5e-1889.7
NC_015381:1318818:133265013326501332958309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:1558263:156518715651871565495309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:1623587:165424416542441654552309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:1623587:167169416716941672002309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:1705383:171572717157271716035309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:252000:263041263041263349309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_015381:3457784:348758434875843487892309Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase IS3/IS911 family protein5e-1889.7
NC_009783:1665610:167267016726701672951282Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-1889.7
NC_009784:1231791:124725112472511247532282Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein5e-1889.7
NC_019902:831911:844422844422844724303Thioalkalivibrio nitratireducens DSM 14787, complete genomeMobile element protein9e-1889
NC_010515:1124298:113944911394491139757309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein1e-1788.6
NC_016626:1699500:173411117341111734419309Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase3e-1787
NC_016626:1669477:168503916850391685347309Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase3e-1787
NC_020304:2677372:270497327049732705275303Desulfocapsa sulfexigens DSM 10523, complete genometransposase4e-1786.7
NC_020304:752012:771813771813772115303Desulfocapsa sulfexigens DSM 10523, complete genometransposase4e-1786.7
NC_009783:2306953:231827323182732318605333Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein6e-1786.3
NC_003063:304962:325209325209325517309Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-1685.1
NC_003305:1743939:174920517492051749549345Agrobacterium tumefaciens str. C58 chromosome linear, completeIS3 family transposase1e-1684.7
NC_009075:1638789:164361716436171643982366Burkholderia pseudomallei 668 chromosome II, complete sequencetransposase6e-1682.8
NC_007298:1759881:177896917789691779271303Dechloromonas aromatica RCB, complete genomeTransposase IS3/IS9115e-1682.8
NC_007298:1824335:183998618399861840288303Dechloromonas aromatica RCB, complete genomeTransposase IS3/IS9115e-1682.8
NC_016626:1592781:160434616043461604651306Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase IS3/IS911 family protein2e-1580.9
NC_016589:2875000:288947028894702889775306Burkholderia sp. YI23 chromosome 1, complete sequencetransposase IS3/IS911 family protein2e-1580.9
NC_007519:3326918:333469033346903334977288Desulfovibrio alaskensis G20 chromosome, complete genometransposase (class V)2e-1477.4
NC_009485:1604942:162024416202441620534291Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase4e-1477
NC_009455:273519:303835303835304119285Dehalococcoides sp. BAV1 chromosome, complete genometransposase IS3/IS911 family protein3e-1477
NC_009455:53000:859258592586209285Dehalococcoides sp. BAV1 chromosome, complete genometransposase IS3/IS911 family protein3e-1477
NC_020911:2921925:293183929318392932156318Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase1e-1375.5
NC_015730:3693391:370642037064203706698279Roseobacter litoralis Och 149 chromosome, complete genomeputative transposase3e-1373.9
NC_017162:270460:288231288231288548318Acinetobacter baumannii 1656-2 chromosome, complete genomeTransposase IS3/IS911 family protein9e-1372.4
NC_014844:2721746:274550027455002745784285Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein3e-1270.5
NC_014844:2721746:274282227428222743106285Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein3e-1270.5
NC_020911:2921925:292192529219252922233309Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase6e-1269.7
NC_008209:3313087:332771433277143328010297Roseobacter denitrificans OCh 114, complete genomehypothetical protein7e-1269.3
NC_020911:3410857:342413034241303424438309Octadecabacter antarcticus 307, complete genomeputative IS3-family transposase8e-1269.3
NC_008740:257434:279940279940280224285Marinobacter aquaeolei VT8, complete genometransposase IS3/IS911 family protein1e-1168.6
NC_015976:3118804:313529831352983135594297Sphingobium sp. SYK-6, complete genomeputative transposase for insertion sequence element1e-1168.2
NC_011758:247666:263326263326263610285Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completetransposase IS3/IS911 family protein1e-1168.2
NC_020911:2998000:300845030084503008758309Octadecabacter antarcticus 307, complete genomeIS3-family mobile element-associated protein2e-1167.8
NC_012724:3100430:312102931210293121310282Burkholderia glumae BGR1 chromosome 1, complete genomeIS3 family transposase orfA2e-1167.8
NC_012918:3558500:356765735676573568007351Geobacter sp. M21 chromosome, complete genometransposase IS3/IS911 family protein2e-1167.8
NC_007626:2204767:221996922199692220262294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-1167
NC_007626:3522265:352673935267393527032294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-1167
NC_007626:1091000:111014511101451110438294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-1167
NC_007626:1863747:187514518751451875438294Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-1167
NC_020409:584000:590254590254590565312Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase5e-1166.2
NC_020409:1589044:159421115942111594522312Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase5e-1166.2
NC_014355:1865003:192454919245491924806258Candidatus Nitrospira defluvii, complete genomeputative transposase InsN for insertion sequence element IS9111e-1065.5
NC_010814:4099:204832048320788306Geobacter lovleyi SZ, complete genometransposase IS3/IS911 family protein1e-1065.5
NC_020911:2998000:303949830394983039806309Octadecabacter antarcticus 307, complete genomeIS3-family mobile element-associated protein9e-1165.5
NC_013730:4440943:4448705444870544498351131Spirosoma linguale DSM 74, complete genome3e-1063.9
NC_007626:3522265:360548336054833605794312Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative5e-1063.2
NC_015259:2757081:276294027629402763233294Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase IS3/family protein6e-1062.8
NC_009337:1448607:146170514617051461992288Chlorobium phaeovibrioides DSM 265 chromosome, complete genometransposase IS3/IS911 family protein1e-0962
NC_014819:25765:422584225842542285Asticcacaulis excentricus CB 48 plasmid pASTEX02, completetransposase IS3/IS911 family protein2e-0961.2
NC_011059:2272747:228790222879022288192291Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein4e-0960.1
NC_014314:238043:267595267595267879285Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completetransposase IS3/IS911 family protein6e-0959.3
NC_011059:2478075:249733324973332497623291Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein7e-0959.3
NC_010125:1051735:106333910633391063650312Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase7e-0959.3
NC_014844:442380:470687470687470965279Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS3/IS911 family protein7e-0959.3
NC_010125:955863:998018998018998329312Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase1e-0858.9
NC_010831:931961:943215943215943505291Chlorobium phaeobacteroides BS1, complete genometransposase IS3/IS911 family protein9e-0958.9
NC_003047:3360000:336272633627263362983258Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-0858.5
NC_014973:4630132:464333746433374643630294Geobacter sp. M18 chromosome, complete genometransposase IS3/IS911 family protein2e-0857.8
NC_013222:615948:623246623246623521276Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-0857.8
NC_016940:421819:428939428939429226288Saprospira grandis str. Lewin chromosome, complete genometransposase IS3/IS911 family protein2e-0857.8
NC_012724:1:867386738894222Burkholderia glumae BGR1 chromosome 1, complete genome2e-0857.4
NC_016940:995500:100305510030551003342288Saprospira grandis str. Lewin chromosome, complete genometransposase IS3/IS911 family protein3e-0857
NC_016940:3696570:370391137039113704198288Saprospira grandis str. Lewin chromosome, complete genometransposase IS3/IS911 family protein3e-0857
NC_007626:3522265:355813135581313558514384Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-0857
NC_008048:389645:424080424080424355276Sphingopyxis alaskensis RB2256, complete genometransposase IS3/IS9114e-0857
NC_014972:137184:151042151042151251210Desulfobulbus propionicus DSM 2032 chromosome, complete genometransposase IS3/IS911 family protein4e-0856.6
NC_008789:1237969:124459712445971244893297Halorhodospira halophila SL1, complete genometransposase IS3/IS911 family protein8e-0855.8
NC_011898:426951:4627794627794639281150Clostridium cellulolyticum H10, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_010803:1009000:102795710279571028250294Chlorobium limicola DSM 245, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_010803:2067539:209753620975362097829294Chlorobium limicola DSM 245, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_011059:65414:809328093281225294Prosthecochloris aestuarii DSM 271, complete genometransposase IS3/IS911 family protein2e-0754.7
NC_015732:2449900:245573724557372456039303Spirochaeta caldaria DSM 7334 chromosome, complete genometransposase IS3/IS911 family protein2e-0754.7
NC_014364:394899:453745453745454077333Spirochaeta smaragdinae DSM 11293 chromosome, complete genometransposase IS3/IS911 family protein3e-0753.9
NC_010803:2067539:210724421072442107537294Chlorobium limicola DSM 245, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_014655:1098428:110605511060551106366312Leadbetterella byssophila DSM 17132 chromosome, complete genometransposase is3/is911 family protein7e-0752.8
NC_011060:1947795:196951919695191969812294Pelodictyon phaeoclathratiforme BU-1, complete genometransposase IS3/IS911 family protein9e-0752.4
NC_015757:2459424:2463054246305424641901137Sulfobacillus acidophilus TPY chromosome, complete genometransposase IS3/IS911 family protein2e-0650.8