Pre_GI: BLASTP Hits

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Query: NC_015761:4355335:4363904 Salmonella bongori NCTC 12419, complete genome

Start: 4363904, End: 4364362, Length: 459

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:558974:5646425646425677433102Bordetella avium 197N, complete genometype I restriction enzyme EcoR124II R protein3e-1270.5
NC_012491:743883:7553787553787584763099Brevibacillus brevis NBRC 100599, complete genometype I restriction modification system endonuclease4e-1270.1
NC_014655:1396672:1400184140018414032823099Leadbetterella byssophila DSM 17132 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family4e-1167
NC_016838:85487:97669976691001642496Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative type I restriction-modification enzyme R subunit4e-1167
NC_011601:4856717:4862628486262848657443117Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme R subunit7e-1166.2
NC_015144:47783:8051080510836113102Weeksella virosa DSM 16922 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1065.9
NC_005823:1105524:1118133111813311212313099Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130type I restriction enzyme1e-1065.5
NC_004342:3164500:317983231798323180767936Leptospira interrogans serovar Lai str. 56601 chromosome I,Restriction enzyme type I helicase subunits and related helicases1e-1065.1
NC_017033:678321:6880396880396911403102Frateuria aurantia DSM 6220 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-1063.2
NC_016838:85487:100260100260100550291Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative type I restriction-modification enzyme R subunit2e-0961.6
NC_015761:299386:3128843128843159913108Salmonella bongori NCTC 12419, complete genometype I restriction enzyme2e-0961.2
NC_016514:506611:5193375193375224563120Enterobacter cloacae EcWSU1 chromosome, complete genometype I restriction enzyme R protein3e-0960.8
NC_017516:1439775:1442427144242714451922766Neisseria meningitidis H44/76 chromosome, complete genome7e-0959.7
NC_003112:844000:8588708588708616352766Neisseria meningitidis MC58, complete genomeputative type I restriction enzyme EcoR124II R protein7e-0959.7
NC_014752:1530000:1533219153321915363173099Neisseria lactamica ST-640, complete genome8e-0959.3
NC_017515:1429317:1434025143402514371233099Neisseria meningitidis M04-240196 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-0959.3
NC_007778:3470661:3480367348036734834833117Rhodopseudomonas palustris HaA2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0858.9
NC_017505:841496:8555268555268586573132Neisseria meningitidis alpha710 chromosome, complete genomeputative type I restriction enzyme EcoR124II R protein1e-0858.5
NC_017514:1396000:1399124139912414022553132Neisseria meningitidis M01-240149 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-0858.5
NC_010939:321492:3322653322653353993135Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative type I site-specific restriction- modification system, R (restriction) subunit3e-0754.3
NC_009053:313779:3226483226483257853138Actinobacillus pleuropneumoniae L20, complete genomeputative type I site-specific restriction-modification system, R (restriction) subunit3e-0754.3
NC_010278:315941:3274473274473305843138Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,type I site-specific deoxyribonuclease7e-0753.1