Pre_GI: BLASTP Hits

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Query: NC_015761:4098481:4105690 Salmonella bongori NCTC 12419, complete genome

Start: 4105690, End: 4106322, Length: 633

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4288980:429616642961664296798633Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-81301
NC_004631:4300457:430764343076434308275633Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-81301
NC_003198:4315807:432299343229934323625633Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-81301
NC_011094:4361238:436841143684114369043633Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-81300
NC_006905:4405301:441247444124744413106633Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane or exported4e-81300
NC_011205:4486142:449331644933164493948633Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-81300
NC_012125:4400636:440780944078094408441633Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-81300
NC_016831:4286000:429333642933364293968633Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-80299
NC_011294:4327904:433507843350784335710633Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-80299
NC_011274:4305812:431298643129864313618633Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-80299
NC_006511:4225455:423277742327774233409633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-80298
NC_011080:4461851:446902544690254469657633Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-80298
NC_010102:4396500:440381344038134404445633Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-80298
NC_011083:4466634:447380844738084474440633Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-80298
NC_011149:4390315:439748743974874398119633Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane or exported1e-80298
NC_011147:4221000:422846442284644229096633Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-80297
NC_003197:4470683:447785744778574478489633Salmonella typhimurium LT2, complete genomehypothetical protein8e-80296
NC_016810:4491975:449914944991494499781633Salmonella enterica subsp. enterica serovar Typhimurium strtype I secretion-related protein8e-80296
NC_016856:4482845:449139944913994492031633Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein8e-80296
NC_016857:4491976:449915044991504499782633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein8e-80296
NC_016860:4575772:458294645829464583578633Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-80296
NC_016863:4431831:443900544390054439637633Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein8e-80296
NC_010067:3310336:334990933499093350556648Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-66251