Pre_GI: BLASTP Hits

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Query: NC_015761:2726000:2735980 Salmonella bongori NCTC 12419, complete genome

Start: 2735980, End: 2736285, Length: 306

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2974333:298424129842412984546306Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex minor subunit2e-50197
NC_010102:2967464:297873329787332979038306Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-50197
NC_003197:3005842:301575130157513016056306Salmonella typhimurium LT2, complete genomeneedle complex minor subunit2e-50197
NC_006905:2960260:296927829692782969583306Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; cytoplasmic2e-50197
NC_006511:2819128:283029728302972830602306Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein2e-50197
NC_011094:2913500:292295729229572923262306Salmonella enterica subsp. enterica serovar Schwarzengrund strprotein PrgJ2e-50197
NC_011147:2814664:282583328258332826138306Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein2e-50197
NC_011205:3050235:306014230601423060447306Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-50197
NC_011274:2881306:289121528912152891520306Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein2e-50197
NC_011294:2890500:290041029004102900715306Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein2e-50197
NC_016810:3028421:303832730383273038632306Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus2e-50197
NC_016856:3026426:303598830359883036293306Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex minor subunit2e-50197
NC_016857:3028421:303832730383273038632306Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex minor subunit2e-50197
NC_016860:3029272:303918130391813039486306Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein2e-50197
NC_004631:2842453:285362228536222853927306Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein6e-49192
NC_003198:2856596:286776528677652868070306Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein6e-49192
NC_010067:84093:984389843898743306Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-49192
NC_017046:3027161:303706730370673037309243Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus4e-39159
NC_016831:2867766:287767428776742877916243Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein4e-39159
NC_012125:2938519:294966229496622949904243Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic cell invasion protein4e-39159
NC_011083:2980356:299026529902652990507243Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein PrgJ4e-39159
NC_011080:2982346:299225529922552992497243Salmonella enterica subsp. enterica serovar Newport str. SL254,protein PrgJ4e-39159
NC_011149:2912219:292427929242792924521243Salmonella enterica subsp. enterica serovar Agona str. SL483,protein PrgJ4e-39159
NC_016832:2829767:284092128409212841163243Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-38157
NC_013961:851044:860320860320860643324Erwinia amylovora, complete genomeProtein PrgJ3e-0753.5