Pre_GI: BLASTP Hits

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Query: NC_015733:3736104:3786432 Pseudomonas putida S16 chromosome, complete genome

Start: 3786432, End: 3787649, Length: 1218

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:4350465:4372562437256243737791218Azotobacter vinelandii DJ, complete genomeGlycolate oxidase iron-sulfur subunit, glcF0651
NC_021150:4350461:4372558437255843737751218Azotobacter vinelandii CA6, complete genomeglycolate oxidase iron-sulfur subunit0651
NC_004431:3513147:3538895353889535402321338Escherichia coli CFT073, complete genome4e-176617
NC_004741:3041294:3100908310090831031902283Shigella flexneri 2a str. 2457T, complete genome1e-172605
NC_008752:261903:2741152741152753741260Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF224, cysteine-rich region domain protein7e-129460
NC_015138:322386:3394403394403406991260Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein1e-127456
NC_008786:3681847:3693930369393036951681239Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF224, cysteine-rich region domain protein8e-120430
NC_015850:2451957:2466212246621224674651254Acidithiobacillus caldus SM-1 chromosome, complete genomeglycolate dehydrogenase, iron-sulfur subunit GlcF2e-105383
NC_014834:614890:6427896427896440961308Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein3e-92338
NC_018643:1309804:1320979132097913222681290Alpha proteobacterium HIMB5 chromosome, complete genomecysteine rich domain-containing protein1e-80300
NC_018000:1852691:1872366187236618736971332Sinorhizobium fredii USDA 257 chromosome, complete genomeglycolate oxidase iron-sulfur subunit GlcF8e-77287
NC_010125:763141:7643557643557656681314Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycolate oxidase iron-sulfur subunit1e-70266
NC_008025:669281:6680076680076692841278Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF224, cysteine-rich region2e-63243
NC_015169:1:1842618426198021377Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequencehypothetical protein2e-56219
NC_017093:5410932:5412383541238354137681386Actinoplanes missouriensis 431, complete genomehypothetical protein2e-46187
NC_006510:2044347:2058546205854620598561311Geobacillus kaustophilus HTA426, complete genomeglycolate oxidase iron-sulfur subunit3e-39162
NC_008820:2268900:2271230227123022727531524Prochlorococcus marinus str. MIT 9303, complete genomeFe-S oxidoreductase4e-39162
NC_007516:124486:1619281619281633041377Synechococcus sp. CC9605, complete genomeputative glycolate oxidase subunit (Fe-S) protein7e-39161
NC_015151:1162647:1180791118079111820591269Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeglycolate oxidase subunit F7e-36151
NC_011901:2914000:2931187293118729324401254Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein3e-35149
NC_014761:1405408:1428266142826614295461281Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein1e-30134
NC_010794:1476494:1495887149588714971551269Methylacidiphilum infernorum V4, complete genomeGlycolate dehydrogenase, iron-sulfur subunit GlcF3e-28126
NC_007519:3240864:3240864324086432430052142Desulfovibrio alaskensis G20 chromosome, complete genomeiron-sulfur cluster-binding protein3e-25116
NC_013894:415776:4265694265694277831215Thermocrinis albus DSM 14484 chromosome, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein4e-25115
NC_011830:4645453:4654178465417846554221245Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein4e-23109
NC_009376:420000:4396824396824408451164Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein5e-23108
NC_007181:163640:166310166310167278969Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein4e-22105
NC_012108:946314:9642699642699656001332Desulfobacterium autotrophicum HRM2, complete genomeGlcF11e-21104
NC_013223:1188500:1213128121312812152812154Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1621e-20101
NC_016885:1614427:1614427161442716155961170Pyrobaculum oguniense TE7 chromosome, complete genomeFe-S oxidoreductase2e-20100
NC_015318:249445:2663582663582684122055Hippea maritima DSM 10411 chromosome, complete genomeLactate utilization protein B/C1e-1998.2
NC_015499:1466794:1474100147410014754071308Thermodesulfobium narugense DSM 14796 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein2e-1997.1
NC_018720:417500:431981431981432799819Bifidobacterium asteroides PRL2011 chromosome, complete genomeFe-S oxidoreductase2e-1894
NC_015930:1397524:140882914088291409596768Lactococcus garvieae ATCC 49156, complete genomeoxidoreductase2e-1790.9
NC_007503:1111457:1157710115771011589481239Carboxydothermus hydrogenoformans Z-2901, complete genomeglycolate oxidase, iron-sulfur subunit8e-1788.6
NC_014121:3627588:3627588362758836287781191Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completesn-glycerol-3-phosphate dehydrogenase subunit C1e-1688.2
NC_014758:1387470:1407718140771814089621245Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein2e-1687.4
NC_015136:2282488:2284431228443122873882958Burkholderia sp. CCGE1001 chromosome 1, complete sequenceD-lactate dehydrogenase (cytochrome)9e-1685.1
NC_017167:674511:695878695878696624747Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein1e-1584.7
NC_013205:747502:764531764531765277747Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF224 cysteine-rich region domain protein2e-1583.6
NC_004193:375416:394993394993395727735Oceanobacillus iheyensis HTE831, complete genomeglycolate oxidase3e-1583.6
NC_014622:2477019:248924224892422489970729Paenibacillus polymyxa SC2 chromosome, complete genomeadenine phosphoribosyltransferase5e-1582.4
NC_007575:601256:6151396151396164221284Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein6e-1582.4
NC_015683:947048:960965960965961750786Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-1480.5
NC_017317:944218:958134958134958919786Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-1480.5
NC_014329:844622:878877878877879662786Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein3e-1480.1
NC_016781:844613:878868878868879653786Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLactate utilization protein A3e-1480.1
NC_017031:863093:878718878718879503786Corynebacterium pseudotuberculosis P54B96 chromosome, completeLactate utilization protein A3e-1480.1
NC_017300:863898:878773878773879558786Corynebacterium pseudotuberculosis 1002 chromosome, completeLactate utilization protein A3e-1480.1
NC_017301:863500:878495878495879280786Corynebacterium pseudotuberculosis C231 chromosome, completeLactate utilization protein A3e-1480.1
NC_017303:863060:878688878688879473786Corynebacterium pseudotuberculosis I19 chromosome, complete genomeLactate utilization protein A3e-1480.1
NC_017305:863072:878700878700879485786Corynebacterium pseudotuberculosis PAT10 chromosome, completeLactate utilization protein A3e-1480.1
NC_016932:832748:866989866989867774786Corynebacterium pseudotuberculosis 316 chromosome, complete genomeLactate utilization protein A3e-1480.1
NC_009434:3611738:361173836117383612559822Pseudomonas stutzeri A1501, complete genomeFe-S oxidoreductase8e-1478.6
NC_019974:2541880:2541880254188025432411362Natronococcus occultus SP4, complete genomeglycerol 3-phosphate dehydrogenase (quinone) subunit C8e-1478.6
NC_000909:67729:8661386613880821470Methanocaldococcus jannaschii DSM 2661, complete genomesuccinate dehydrogenase9e-1478.2
NC_008253:334467:398270398270398989720Escherichia coli 536, complete genomehypothetical protein YkgE1e-1274.7
NC_007946:289425:341575341575342294720Escherichia coli UTI89, complete genomehypothetical protein YkgE1e-1274.7
NC_008563:318993:343165343165343884720Escherichia coli APEC O1, complete genomehypothetical protein1e-1274.7
NC_004431:364000:406102406102406821720Escherichia coli CFT073, complete genomeHypothetical protein ykgE1e-1274.7
NC_013922:938091:9550969550969565321437Natrialba magadii ATCC 43099 chromosome, complete genomeglycerol-3-phosphate dehydrogenase, anaerobic, C subunit1e-1274.7
NC_011415:351810:355690355690356409720Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1274.3
NC_009800:349592:372205372205372924720Escherichia coli HS, complete genomecysteine-rich domain protein2e-1274.3
NC_012912:242709:2439562439562451581203Dickeya zeae Ech1591, complete genomeglycerol-3-phosphate dehydrogenase, anaerobic, C subunit2e-1274.3
NC_015658:319296:3356423356423388363195Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceD-lactate dehydrogenase (cytochrome)8e-1272
NC_010473:279948:296382296382297101720Escherichia coli str. K-12 substr. DH10B, complete genomepredicted oxidoreductase7e-1272
NC_000913:303719:320832320832321551720Escherichia coli K12, complete genomepredicted oxidoreductase7e-1272
AC_000091:303719:320832320832321551720Escherichia coli W3110 DNA, complete genomepredicted oxidoreductase7e-1272
NC_012947:3487392:349042934904293491148720Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-1272
NC_008309:555680:5556805556805569511272Haemophilus somnus 129PT, complete genomeglycerol-3-phosphate dehydrogenase, subunit C1e-1171.2
NC_015567:1206727:122713012271301227849720Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-1170.9
NC_013501:777947:801597801597802331735Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-1170.9
NC_015566:1206500:122694512269451227664720Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-1170.9
NC_004129:926479:944204944204945028825Pseudomonas fluorescens Pf-5, complete genomecysteine-rich domain protein2e-1170.9
NC_015388:1678000:167900416790041679726723Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-1170.5
NC_015957:3342169:334445333444533345205753Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein4e-1169.7
NC_018531:1991218:1993356199335619963042949Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein8e-1168.6
NC_007492:857428:884666884666885490825Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF224, cysteine-rich region2e-1067
NC_013967:1375255:1408197140819714095071311Haloferax volcanii DS2 chromosome, complete genomeglycerol-3-phosphate dehydrogenase subunit C5e-1065.9
NC_015859:370500:374513374513375337825Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-1065.1
NC_013202:2449500:2450933245093324540043072Halomicrobium mukohataei DSM 12286, complete genomeD-lactate dehydrogenase (cytochrome)1e-0964.7
NC_015703:3637312:363856336385633639297735Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein3e-0963.5
NC_010525:285805:2959022959022973171416Thermoproteus neutrophilus V24Sta, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0963.2
NC_015683:1176449:1191857119185711947782922Corynebacterium ulcerans BR-AD22 chromosome, complete genomeputative RNA helicase4e-0963.2
NC_007484:495784:4966644966644996182955Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein6e-0962.4
NC_016070:371185:3899713899713914521482Thermoproteus tenax Kra 1, complete genomeiron-sulfur protein3e-0860.1
NC_014752:1363562:136356213635621364341780Neisseria lactamica ST-640, complete genomehypothetical protein3e-0756.6
NC_009376:420000:440971440971441264294Pyrobaculum arsenaticum DSM 13514 chromosome, complete genome4Fe-4S ferredoxin5e-0756.2
NC_013235:3913000:391523839152383915987750Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein6e-0755.8
NC_008767:1363288:136497813649781365757780Neisseria meningitidis FAM18, complete genomehypothetical protein8e-0755.5
NC_016885:809000:8476358476358490441410Pyrobaculum oguniense TE7 chromosome, complete genomeFe-S oxidoreductase9e-0755.1
NC_013851:2317091:2335909233590923371741266Allochromatium vinosum DSM 180 chromosome, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein8e-0755.1
NC_013235:4091185:409118540911854091934750Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF224 cysteine-rich region domain protein2e-0654.3
NC_009376:794562:8103918103918118091419Pyrobaculum arsenaticum DSM 13514 chromosome, complete genome4Fe-4S ferredoxin2e-0654.3
NC_013440:625867:6311286311286341062979Haliangium ochraceum DSM 14365, complete genomeD-lactate dehydrogenase (cytochrome)2e-0653.9
NC_014643:535708:551183551183551974792Rothia dentocariosa ATCC 17931 chromosome, complete genomecysteine-rich domain-containing protein6e-0652.4