Pre_GI: BLASTP Hits

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Query: NC_015662:15641:15641 Buchnera aphidicola (Cinara tujafilina) chromosome, complete

Start: 15641, End: 16123, Length: 483

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008513:13484:144261442614992567Buchnera aphidicola str. Cc (Cinara cedri), complete genomeYhhF3e-30130
NC_004545:15650:245952459525185591Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative methylase3e-23107
NC_011742:3799788:381825038182503818846597Escherichia coli S88 chromosome, complete genome16S rRNA m(2)G966-methyltransferase3e-21100
NC_008563:3888232:390351039035103904106597Escherichia coli APEC O1, complete genomeputative methyltransferase3e-21100
NC_007946:3855445:387071538707153871311597Escherichia coli UTI89, complete genomehypothetical protein3e-21100
NC_008344:2465042:246772724677272468281555Nitrosomonas eutropha C91, complete genomeputative methyltransferase2e-1994.4
NC_013960:2261487:228324722832472283825579Nitrosococcus halophilus Nc4 chromosome, complete genomemethyltransferase6e-1889.7
NC_010524:3914880:391488039148803915542663Leptothrix cholodnii SP-6, complete genomemethyltransferase1e-1789
NC_007508:3065621:306895930689593069582624Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative methyltransferase4e-1683.6
NC_003919:2956404:295974229597422960365624Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-1682.8
NC_007404:387827:407826407826408398573Thiobacillus denitrificans ATCC 25259, complete genomeConserved hypothetical protein 954e-1580.5
NC_010688:2052619:206927920692792070079801Xanthomonas campestris pv. campestris, complete genomePutative methyltransferase8e-1579.3
NC_010084:534937:540192540192540806615Burkholderia multivorans ATCC 17616 chromosome 1, completemethyltransferase9e-1579.3
NC_017501:121902:129246129246129815570Neisseria meningitidis 8013, complete genomeputative methylase1e-1479
NC_017513:115870:123215123215123784570Neisseria meningitidis G2136 chromosome, complete genomemethyltransferase family protein1e-1479
NC_017516:123618:130968130968131537570Neisseria meningitidis H44/76 chromosome, complete genomemethyltransferase family protein2e-1478.6
NC_013016:2041890:205596720559672056536570Neisseria meningitidis alpha14 chromosome, complete genomeputative DNA methylase2e-1478.6
NC_017512:2116295:213036821303682130937570Neisseria meningitidis WUE 2594, complete genomeputative methylase1e-1478.6
NC_010120:2055803:206988120698812070456576Neisseria meningitidis 053442, complete genomeDNA methylase6e-1476.6
NC_015185:792933:792933792933793514582Desulfurobacterium thermolithotrophum DSM 11699 chromosome,methyltransferase2e-1271.2
NC_015160:2295010:229809622980962298629534Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein3e-1271.2
NC_013385:90331:105487105487106056570Ammonifex degensii KC4, complete genomemethyltransferase3e-1270.9
NC_014483:1954856:195968719596871960328642Paenibacillus polymyxa E681 chromosome, complete genomeN6-adenine-specific methylase3e-1270.9
NC_013517:2607043:260815726081572608708552Sebaldella termitidis ATCC 33386, complete genomemethyltransferase4e-1270.5
NC_016584:4905310:490531049053104905864555Desulfosporosinus orientis DSM 765 chromosome, complete genomeRsmD family RNA methyltransferase9e-1269.3
NC_006448:1451729:146242914624291462977549Streptococcus thermophilus LMG 18311, complete genomemethyltransferase, putative7e-1166.2
NC_014964:1309845:133028013302801330834555Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completemethyltransferase1e-1065.9
NC_015958:1422319:144209614420961442650555Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomemethyltransferase1e-1065.5
NC_016929:474000:490852490852491424573Rickettsia canadensis str. CA410 chromosome, complete genomeN6-adenine-specific methylase2e-1065.1
NC_016027:2047954:210963921096392110217579Gluconacetobacter xylinus NBRC 3288, complete genomeN6-adenine-specific methylase2e-1065.1
NC_009879:475500:491538491538492110573Rickettsia canadensis str. McKiel, complete genomeN6-adenine-specific methylase2e-1064.7
NC_015177:258504:263874263874264428555Pedobacter saltans DSM 12145 chromosome, complete genomemethyltransferase3e-1064.3
NC_017243:2955597:295847829584782959041564Brachyspira intermedia PWS/A chromosome, complete genomeN6-adenine-specific methylase4e-1063.9
NC_014166:2055984:208078020807802081370591Arcobacter nitrofigilis DSM 7299 chromosome, complete genomemethyltransferase5e-1063.5
NC_014550:1581812:164688016468801647464585Arthrobacter arilaitensis Re117, complete genomeputative site-specific DNA-methyltransferase (adenine specific)5e-1063.5
NC_002976:707827:709691709691710233543Staphylococcus epidermidis RP62A, complete genomehypothetical protein7e-1063.2
NC_004461:813748:815612815612816154543Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein7e-1063.2
NC_011593:391297:404983404983405594612Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,methyltransferase1e-0962.4
NC_017219:391100:404777404777405388612Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative methylase1e-0962.4
NC_013209:2782500:278401527840152784599585Acetobacter pasteurianus IFO 3283-01, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017100:2782303:278380727838072784391585Acetobacter pasteurianus IFO 3283-03, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017108:2779303:278114427811442781728585Acetobacter pasteurianus IFO 3283-12, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017111:2779321:278116227811622781746585Acetobacter pasteurianus IFO 3283-32, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017121:2781000:278256427825642783148585Acetobacter pasteurianus IFO 3283-07, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017125:2782283:278378727837872784371585Acetobacter pasteurianus IFO 3283-22, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017146:2782325:278382927838292784413585Acetobacter pasteurianus IFO 3283-26, complete genomeN6-adenine-specific methylase1e-0962.4
NC_017150:2689920:269176126917612692345585Acetobacter pasteurianus IFO 3283-01-42C, complete genomeN6-adenine-specific methylase1e-0962.4
NC_019892:9280367:928413992841399284819681Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRsmD family RNA methyltransferase2e-0962
NC_019892:9280367:929567492956749296354681Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRsmD family RNA methyltransferase1e-0962
NC_008820:808886:825065825065825709645Prochlorococcus marinus str. MIT 9303, complete genomeN6-adenine-specific methylase2e-0961.6
NC_010730:180000:198228198228198701474Sulfurihydrogenibium sp. YO3AOP1, complete genomeProtein of unknown function methylase putative3e-0961.2
NC_018677:111500:114765114765115379615Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRibosomal RNA small subunit methyltransferase D4e-0960.8
NC_018507:115346:121198121198121812615Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome16S rRNA m(2)G966 methyltransferase4e-0960.8
NC_017058:671000:686737686737687315579Rickettsia australis str. Cutlack chromosome, complete genomeN6-adenine-specific methylase4e-0960.5
NC_002937:1578213:159975115997511600323573Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completemethyltransferase, putative4e-0960.5
NC_009881:724269:727138727138727716579Rickettsia akari str. Hartford, complete genomeN6-adenine-specific methylase6e-0960.1
NC_018515:3909646:391015739101573910708552Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRsmD family RNA methyltransferase8e-0959.7
NC_013939:148706:160910160910161440531Deferribacter desulfuricans SSM1, complete genomeDNA methylase2e-0858.2
NC_010483:1441614:145363314536331454160528Thermotoga sp. RQ2, complete genomemethyltransferase3e-0857.4
NC_016633:2239413:226197622619762262536561Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeRNA methyltransferase, RsmD family5e-0857
NC_007799:186000:200523200523201074552Ehrlichia chaffeensis str. Arkansas, complete genomeputative methyltransferase3e-0754.3
NC_011244:213853:219364219364219960597Borrelia recurrentis A1, complete genomeN6-adenine-specific methylase, putative3e-0754.3
NC_006833:1011537:105052310505231051071549Wolbachia endosymbiont strain TRS of Brugia malayi, completeN6-adenine-specific methylase4e-0753.9
NC_010673:205500:207140207140207712573Borrelia hermsii DAH, complete genomemethyltransferase4e-0753.9
NC_014644:1363445:136777513677751368356582Gardnerella vaginalis ATCC 14019 chromosome, complete genomeputative rRNA (guanine-N(2)-)-methyltransferase5e-0753.5
NC_018664:1729794:173539517353951735958564Clostridium acidurici 9a chromosome, complete genomeRNA methyltransferase, RsmD family6e-0753.5
NC_015672:101878:119860119860120396537Flexistipes sinusarabici DSM 4947 chromosome, complete genomemethyltransferase4e-0650.8
NC_010118:1:121061210612624519Candidatus Sulcia muelleri GWSS, complete genomeputative methyltransferase6e-0650.1