Pre_GI Gene

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Host: NC_011593 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:391297 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3912973941312835DEADDEAH box helicaseQuickGO ontologyBLASTP
394269394787519LacI-family transcriptional regulatorQuickGO ontologyBLASTP
395169396080912binding-protein-dependent transport system inner membrane proteinQuickGO ontologyBLASTP
396080397057978binding-protein-dependent transport system inner membrane proteinQuickGO ontologyBLASTP
3971513985601410family 1 extracellular solute-binding proteinQuickGO ontologyBLASTP
398650399279630Mandelate racemasemuconate lactonizing domain-containing proteinQuickGO ontologyBLASTP
3995364007591224major facilitator superfamily proteinQuickGO ontologyBLASTP
4008374028612025hypothetical proteinBLASTP
4031144042921179hypothetical proteinBLASTP
404303404902600hypothetical proteinBLASTP
404983405594612methyltransferaseQuickGO ontologyBLASTP
405618406433816tRNA guanine-N1--methyltransferaseQuickGO ontologyBLASTP
4065074081531647peptidase U32QuickGO ontologyBLASTP
408255409235981hypothetical proteinBLASTP