Pre_GI: BLASTP Hits

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Query: NC_015656:632960:640915 Frankia symbiont of Datisca glomerata chromosome, complete genome

Start: 640915, End: 641499, Length: 585

Host Lineage: Frankia symbiont of Datisca glomerata; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Host, Plant symbiont, Soil; Isolation: Datisca glomerata; Temp: Mesophile. Frankia symbiont of Datisca glomerata. Frankia sp. strains form N2-fixing root nodules on woody trees and shrubs. This is a symbiont of the eudicot Datisca glomerata.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:565947:579529579529580140612Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-67253
NC_013929:3953046:397154439715443972242699Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-55214
NC_013929:3953046:396964339696433970329687Streptomyces scabiei 87.22 chromosome, complete genomesigma factor1e-52206
NC_018750:3481476:348147634814763482261786Streptomyces venezuelae ATCC 10712, complete genomeputative RNA polymerase ECF-subfamily sigma factor5e-1684
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)3e-1271.2
NC_013235:1325975:133005913300591330667609Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, LuxR family6e-1270.5
NC_012704:376783:395308395308395919612Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor D2e-1168.9
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1168.2
NC_014829:4422314:442603644260364426554519Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1066.6
NC_009523:379705:396061396061396654594Roseiflexus sp. RS-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-1066.6
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU2e-1065.5
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C3e-1065.1
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor3e-1064.7
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor4e-1064.3
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor5e-1064.3
NC_016609:2224212:223966622396662240211546Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0961.6
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE4e-0961.2
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_016802:221343:238193238193238759567Corynebacterium diphtheriae HC02 chromosome, complete genomeECF-family sigma factor C5e-0960.8
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0960.5
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0960.1
NC_016799:267310:284174284174284740567Corynebacterium diphtheriae 31A chromosome, complete genomeECF family sigma factor C1e-0859.7
NC_016783:201066:218683218683219249567Corynebacterium diphtheriae INCA 402 chromosome, complete genomeECF-family sigma factor C1e-0859.7
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-244e-0858.2
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.8
NC_016932:175872:183028183028183591564Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor4e-0857.8
NC_013595:4951396:496504449650444965529486Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.4
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor6e-0857
NC_006350:1938631:196639319663931966929537Burkholderia pseudomallei K96243 chromosome 1, complete sequenceRNA polymerase sigma-70 factor9e-0856.6
NC_017317:246155:250784250784251347564Corynebacterium ulcerans 809 chromosome, complete genomeECF-family sigma factor C1e-0756.6
NC_015683:241377:246024246024246587564Corynebacterium ulcerans BR-AD22 chromosome, complete genomeECF family sigma factor C1e-0756.6
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E2e-0755.5
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0755.1
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor5e-0754.3
NC_008278:132000:146785146785147303519Frankia alni ACN14a, complete genomePutative RNA polymerase ECF-subfamily sigma factor6e-0753.9
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.1
NC_014355:3669470:367093436709343671530597Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma factor SigK (Sigma-K)1e-0653.1
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.8
NC_011894:2747491:276819727681972768877681Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_009077:2308634:230980423098042310280477Mycobacterium sp. JLS, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor2e-0652
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily3e-0651.6
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW4e-0651.2
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W4e-0651.2
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W4e-0651.2
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW4e-0651.2
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor4e-0651.2
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW4e-0651.2
NC_015312:1371530:137219713721971372742546Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit6e-0650.8
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H7e-0650.4