Pre_GI: BLASTP Hits

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Query: NC_015410:2505168:2525939 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2525939, End: 2527039, Length: 1101

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:2807574:2807574280757428086501077Enterobacter aerogenes KCTC 2190 chromosome, complete genometRNA 2-selenouridine synthase2e-84313
NC_020260:2725201:2753961275396127551391179Cronobacter sakazakii Sp291, complete genometRNA 2-selenouridine synthase8e-72270
NC_015571:168617:1686171686171696511035Porphyromonas gingivalis TDC60, complete genometRNA 2-selenouridine synthase1e-34147
NC_010729:2038118:2038118203811820391521035Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein1e-34147
NC_002950:1981155:1984705198470519857391035Porphyromonas gingivalis W83, complete genomerhodanese-like domain protein3e-34146
NC_002937:614000:6330966330966341361041Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completerhodanese-like domain protein5e-33142
NC_008751:2774000:2780450278045027814901041Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeRhodanese domain protein7e-33141
NC_007335:117572:1385271385271395791053Prochlorococcus marinus str. NATL2A, complete genomerhodanese-like9e-33141
NC_014802:441000:458995458995459993999Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeGTP-binding protein5e-32139
NC_008819:679320:7013037013037023551053Prochlorococcus marinus str. NATL1A, complete genomePredicted ATPase1e-31137
NC_015693:53196:7119971199722421044Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequencetRNA 2-selenouridine synthase8e-32137
NC_017280:435347:4538924538924548961005Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeGTP-binding protein9e-31134
NC_008787:437786:4563324563324573361005Campylobacter jejuni subsp. jejuni 81-176, complete genometRNA 2-selenouridine synthase9e-31134
NC_003366:2356148:2370650237065023717201071Clostridium perfringens str. 13, complete genomeprobable ATP /GTP binding protein1e-28127
NC_013517:1038000:1052379105237910534071029Sebaldella termitidis ATCC 33386, complete genometRNA 2-selenouridine synthase8e-28124
NC_008262:2242432:2257146225714622582161071Clostridium perfringens SM101, complete genomehypothetical protein2e-27123
NC_014118:2316000:2334907233490723359741068Burkholderia sp. CCGE1002 chromosome chromosome 2, completetRNA 2-selenouridine synthase2e-23110
NC_014153:2282725:2288370228837022894971128Thiomonas intermedia K12 chromosome, complete genometRNA 2-selenouridine synthase4e-23109