Pre_GI: BLASTP Hits

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Query: NC_015275:4055148:4096380 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 4096380, End: 4097630, Length: 1251

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2356500:2366420236642023685732154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family1e-128460
NC_009012:3354477:3383076338307633852292154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family1e-128459
NC_009012:3354477:3362822336282233649752154Clostridium thermocellum ATCC 27405, complete genomephage / plasmid primase, P4 family9e-126450
NC_009012:3324000:333976333397633340554792Clostridium thermocellum ATCC 27405, complete genomehypothetical protein3e-73276
NC_009012:2356500:236035523603552361155801Clostridium thermocellum ATCC 27405, complete genomehypothetical protein9e-73274
NC_009012:3354477:337019433701943370994801Clostridium thermocellum ATCC 27405, complete genomeprophage Lp4 protein 7, DNA replication4e-69262
NC_014393:1022843:1027660102766010303412682Clostridium cellulovorans 743B chromosome, complete genomeBifunctional DNA primase/polymerase2e-50199
NC_008060:476861:4895804895804918202241Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencePhage-plasmid primase P4-like2e-38160
NC_008542:1021848:1034227103422710364672241Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage/plasmid primase, P4 family2e-38160
NC_020126:2381380:2397905239790524004542550Myxococcus stipitatus DSM 14675, complete genomeBifunctional DNA Primase/polymerase3e-34146
NC_015520:3038770:305657330565733057388816Mahella australiensis 50-1 BON chromosome, complete genomebifunctional DNA primase/polymerase9e-32138
NC_010511:1273610:129396712939671294836870Methylobacterium sp. 4-46 chromosome, complete genomebifunctional DNA primase/polymerase1e-30134
NC_015660:1076159:1089446108944610917432298Geobacillus thermoglucosidasius C56-YS93 chromosome, completephage/plasmid primase, P4 family4e-27122
NC_003888:6103534:6111554611155461138242271Streptomyces coelicolor A3(2), complete genomeATP binding protein1e-25117
NC_017030:8599515:8615278861527886180072730Corallococcus coralloides DSM 2259 chromosome, complete genomeBifunctional DNA Primase/polymerase3e-25116
NC_016627:1723104:1741360174136017436002241Clostridium clariflavum DSM 19732 chromosome, complete genomephage/plasmid primase, P4 family, C-terminal domain protein3e-22106
NC_006322:3418268:3458909345890934613262418Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-22105
NC_006270:3418097:3458738345873834611552418Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein5e-22105
NC_010644:1540249:154518315451831545950768Elusimicrobium minutum Pei191, complete genomebifunctional DNA primase/polymerase1e-20101
NC_015578:2026741:2039179203917920405731395Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein8e-2098.6
NC_015578:1940097:1975443197544319768791437Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein4e-1996.3
NC_016026:296951:3065803065803088382259Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage/plasmid primase, P4 family1e-1791.7
NC_009012:3354477:335933633593363359644309Clostridium thermocellum ATCC 27405, complete genomehypothetical protein1e-1791.3
NC_016026:2082500:2092628209262820943341707Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeprimase family protein1e-1687.8
NC_017249:5255967:525596752559675256803837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1585.1
NC_010162:5651746:5663639566363956650151377Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1583.6
NC_012796:1645856:1656031165603116574791449Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-1582.8
NC_017249:4365935:437678543767854377621837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-1581.6
NC_010610:535790:5463765463765486852310Lactobacillus fermentum IFO 3956, complete genomephage primase1e-1378.2
NC_015428:1544728:1579545157954515818482304Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage/plasmid primase, P4 family1e-1274.7
NC_008024:804157:811604811604812416813Streptococcus pyogenes MGAS10750, complete genomephage protein1e-1274.3
NC_008024:548165:555431555431556243813Streptococcus pyogenes MGAS10750, complete genomephage protein2e-1273.9
NC_008021:531730:538996538996539808813Streptococcus pyogenes MGAS9429, complete genomephage protein2e-1273.9
NC_008022:771767:780337780337781149813Streptococcus pyogenes MGAS10270, complete genomephage protein2e-1273.9
NC_003295:856775:8796328796328819292298Ralstonia solanacearum GMI1000, complete genomehypothetical protein8e-1272
NC_003212:2592600:2610169261016926124422274Listeria innocua Clip11262, complete genomehypothetical protein7e-1272
NC_013766:1293144:1306552130655213088402289Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein7e-1272
NC_013768:1260317:1273256127325612755442289Listeria monocytogenes 08-5923, complete genomehypothetical protein7e-1272
NC_010814:3332088:3335396333539633374832088Geobacter lovleyi SZ, complete genomephage/plasmid primase, P4 family9e-1271.6
NC_013729:380312:397209397209398081873Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase9e-1271.6
NC_013665:1766158:1779852177985217811711320Methanocella paludicola SANAE, complete genomehypothetical protein9e-1271.6
NC_013729:2287884:229122822912282292154927Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase1e-1171.2
NC_007645:5801295:5801295580129558035712277Hahella chejuensis KCTC 2396, complete genomepredicted ATPase3e-1170.1
NC_010572:3363830:340155534015553402439885Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein6e-1168.9
NC_009464:931647:9434179434179460202604Uncultured methanogenic archaeon RC-I, complete genomehypothetical phage-like protein9e-1168.6
NC_008751:1043269:1083858108385810860742217Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid/phage primase, P4 family2e-1067.4
NC_013729:5982000:599219759921975993075879Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase3e-1067
NC_010610:269380:289237289237290061825Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-1066.6
NC_015576:1442713:144343714434371444348912Mycobacterium sp. JDM601 chromosome, complete genomeRecA-family ATPase-like protein5e-1065.9
NC_012984:520000:525366525366526160795Lactobacillus plantarum JDM1, complete genomeprophage Lp3 protein 76e-1065.5
NC_013729:3573000:359049435904943591417924Kribbella flavida DSM 17836, complete genomeBifunctional DNA primase/polymerase9e-1065.1
NC_010002:3753000:3753413375341337559862574Delftia acidovorans SPH-1, complete genomephage/plasmid primase, P4 family1e-0964.7
NC_015312:1191633:119453211945321195479948Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeBifunctional DNA primase/polymerase1e-0964.3
NC_004606:877707:888810888810889397588Streptococcus pyogenes SSI-1, complete genomehypothetical protein2e-0964.3
NC_012471:781063:792627792627793454828Streptococcus equi subsp. equi 4047, complete genomephage protein2e-0963.9
NC_015593:2103815:2115421211542121175052085Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeBifunctional DNA primase/polymerase3e-0963.2
NC_014974:1570037:158510715851071586009903Thermus scotoductus SA-01 chromosome, complete genomebifunctional DNA primase/polymerase, N- family8e-0962
NC_006569:69939:8294082940847511812Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencehypothetical protein8e-0962
NC_015593:2553500:2578299257829925800231725Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeBifunctional DNA primase/polymerase1e-0861.6
NC_015422:2078618:2103438210343821057382301Alicycliphilus denitrificans K601 chromosome, complete genomephage/plasmid primase, P4 family1e-0861.2
NC_016027:1776300:178071717807171781520804Gluconacetobacter xylinus NBRC 3288, complete genomeDNA recombinase1e-0861.2
NC_012796:77071:1010401010401028601821Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-0860.8
NC_010617:988758:100387710038771004782906Kocuria rhizophila DC2201, complete genomehypothetical protein3e-0860.1
NC_015656:5084767:509173950917395092617879Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase3e-0860.1
NC_015656:4367764:437685843768584377760903Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase5e-0859.3
NC_009256:3601080:3601080360108036034072328Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein8e-0858.9
NC_015656:132633:159042159042159680639Frankia symbiont of Datisca glomerata chromosome, complete genomeBifunctional DNA primase/polymerase7e-0858.9
NC_004463:9031331:9047328904732890487551428Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein8e-0858.5
NC_019673:1988853:202206520220652022901837Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0758.2
NC_014815:3272791:329106232910623291961900Micromonospora sp. L5 chromosome, complete genomebifunctional DNA primase/polymerase5e-0756.2
NC_003903:167825:1867101867101882301521Streptomyces coelicolor A3(2) plasmid SCP1, complete sequenceputative dna primase/helicase8e-0755.5
NC_013929:5952380:595784059578405958745906Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein8e-0755.5
NC_014365:2888897:2892843289284328950922250Desulfarculus baarsii DSM 2075 chromosome, complete genomephage/plasmid primase, P4 family1e-0654.3
NC_012803:3691:296482964830592945Micrococcus luteus NCTC 2665, complete genomehypothetical protein4e-0652.8
NC_014311:198542:2200012200012222802280Ralstonia solanacearum PSI07 chromosome, complete genomeDNA primase, phage/plasmid6e-0652.4