Pre_GI: BLASTP Hits

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Query: NC_015214:437733:467462 Lactobacillus acidophilus 30SC chromosome, complete genome

Start: 467462, End: 468823, Length: 1362

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021184:3571014:3588119358811935894231305Desulfotomaculum gibsoniae DSM 7213, complete genometransposase family protein5e-48192
NC_019940:3660754:3669951366995136711861236Thioflavicoccus mobilis 8321 chromosome, complete genometransposase family protein6e-1789
NC_009656:115390:1249551249551262261272Pseudomonas aeruginosa PA7 chromosome, complete genometransposase DDE domain-containing protein2e-1480.9
NC_007613:4119771:4131701413170141330171317Shigella boydii Sb227, complete genomeIS4 ORF8e-0858.9
NC_004337:3590323:3938517393851739398631347Shigella flexneri 2a str. 301, complete genomeIS4 ORF1e-0758.5
NC_017328:3655876:3674947367494736762931347Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF1e-0758.5
NC_008258:269806:2883692883692897151347Shigella flexneri 5 str. 8401, complete genomeIS4 ORF1e-0758.5
NC_004741:4132056:4132056413205641333841329Shigella flexneri 2a str. 2457T, complete genomeIS4 orf1e-0758.2
NC_017328:3935185:3943321394332139446491329Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF2e-0757.4
NC_005139:2201820:2256801225680122581381338Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-0653.5