Pre_GI: BLASTP Hits

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Query: NC_014328:4073714:4079917 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 4079917, End: 4080702, Length: 786

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:805867:824819824819825625807Clostridium difficile BI1, complete genomecarbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit1e-113409
NC_013315:796313:815265815265816071807Clostridium difficile CD196 chromosome, complete genomecarbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit1e-113409
NC_013316:796895:812805812805813611807Clostridium difficile R20291, complete genomeputative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit1e-113409
NC_009089:873295:889217889217890023807Clostridium difficile 630, complete genomeputative carbon monoxide dehydrogenase/acetyl-CoA synthase complex,methyltransferase subunit1e-113409
NC_014614:1309203:132746013274601328245786Clostridium sticklandii, complete genome5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase2e-112404
NC_015519:586000:601885601885602670786Tepidanaerobacter sp. Re1 chromosome, complete genomedihydropteroate synthase DHPS4e-103374
NC_015682:379373:3844573844573868472391Thermodesulfobacterium sp. OPB45 chromosome, complete genomeCO dehydrogenase/acetyl-CoA synthase subunit delta, TIM barrel3e-32138
NC_009495:1759759:1759759175975917621372379Clostridium botulinum A str. ATCC 3502 chromosome, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase2e-31136
NC_021184:3961552:397954539795453980345801Desulfotomaculum gibsoniae DSM 7213, complete genomePterin binding enzyme8e-29127
NC_011837:950000:9826299826299850342406Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-27122
NC_018664:2638102:2654716265471626570942379Clostridium acidurici 9a chromosome, complete genomevitamin B12-dependent methionine synthase MetH9e-27120
NC_018870:354164:370079370079370882804Thermacetogenium phaeum DSM 12270 chromosome, complete genomemethionine synthase MetH6e-25114
NC_018515:3600869:362550336255033626309807Desulfosporosinus meridiei DSM 13257 chromosome, complete genomePterin binding enzyme8e-25114
NC_007644:362000:391306391306392103798Moorella thermoacetica ATCC 39073, complete genome5-methyltetrahydrofolate--homocysteine S-methyltransferase4e-24112
NC_014328:711842:7333187333187357172400Clostridium ljungdahlii ATCC 49587 chromosome, complete genomemethionine synthase6e-24111
NC_007644:1352794:136269313626931363490798Moorella thermoacetica ATCC 39073, complete genome5-methyltetrahydrofolate--homocysteine S-methyltransferase6e-24111
NC_015500:2866027:2911707291170729142952589Treponema brennaborense DSM 12168 chromosome, complete genomeMethionine synthase3e-23108
NC_018515:3169973:318717031871703187967798Desulfosporosinus meridiei DSM 13257 chromosome, complete genomePterin binding enzyme2e-22105
NC_018867:2063741:207344920734492074246798Dehalobacter sp. CF chromosome, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase4e-21102
NC_018866:2033960:204366820436682044465798Dehalobacter sp. DCA chromosome, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase4e-21102
NC_016584:3617439:362388936238893624749861Desulfosporosinus orientis DSM 765 chromosome, complete genomePterin binding enzyme3e-21102
NC_014657:673500:690267690267691064798Caldicellulosiruptor owensensis OL chromosome, complete genomedihydropteroate synthase dhps1e-1997.1
NC_019903:2578966:258491825849182585727810Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,Pterin binding enzyme1e-1996.7
NC_007644:2205599:221100022110002211797798Moorella thermoacetica ATCC 39073, complete genome5-methyltetrahydrofolate--homocysteine S-methyltransferase2e-1996.3
NC_014624:3463272:346633034663303467127798Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1995.5
NC_016751:1623756:1638364163836416407122349Marinitoga piezophila KA3 chromosome, complete genomehomocysteine S-methyltransferase8e-1994.4
NC_005071:786000:7910007910007946443645Prochlorococcus marinus str. MIT 9313, complete genomeputative methionine synthase1e-1790.1
NC_000911:2747604:2751026275102627546133588Synechocystis sp. PCC 6803, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase5e-1684.7
NC_017039:2745432:2748854274885427524413588Synechocystis sp. PCC 6803 substr. PCC-P, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase5e-1684.7
NC_017052:2745420:2748842274884227524293588Synechocystis sp. PCC 6803 substr. PCC-N, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase5e-1684.7
NC_017277:2746421:2749843274984327534303588Synechocystis sp. PCC 6803, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase5e-1684.7
NC_015145:3657103:3679212367921236827843573Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomemethionine synthase (B12-dependent)4e-1582
NC_008541:4066294:4068551406855140722013651Arthrobacter sp. FB24 chromosome 1, complete sequencemethionine synthase7e-1581.3
NC_014150:137315:1410541410541436692616Brachyspira murdochii DSM 12563 chromosome, complete genome1e-1480.5
NC_008702:4064470:4079534407953440832353702Azoarcus sp. BH72, complete genomeprobable methionine synthase1e-1480.1
NC_011830:1190502:119848111984811199284804Desulfitobacterium hafniense DCB-2, complete genomedihydropteroate synthase DHPS4e-1478.6
NC_014365:1094516:113011211301121130906795Desulfarculus baarsii DSM 2075 chromosome, complete genomedihydropteroate synthase DHPS1e-1377
NC_004347:1038253:1066803106680310705373735Shewanella oneidensis MR-1, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase2e-1376.3
NC_014758:245707:2505662505662539463381Calditerrivibrio nitroreducens DSM 19672 chromosome, completemethionine synthase (b12-dependent)2e-1376.3
NC_008322:3758500:3759469375946937632033735Shewanella sp. MR-7, complete genomemethionine synthase2e-1376.3
NC_008321:977500:9897349897349934683735Shewanella sp. MR-4, complete genomemethionine synthase2e-1376.3
NC_011663:1159070:1173421117342111771553735Shewanella baltica OS223 chromosome, complete genomeB12-dependent methionine synthase3e-1375.5
NC_010506:4951500:4960016496001649637713756Shewanella woodyi ATCC 51908, complete genomemethionine synthase8e-1374.3
NC_018750:1390029:1404726140472614082563531Streptomyces venezuelae ATCC 10712, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase1e-1273.9
NC_009831:4539952:4550071455007145538293759Shewanella sediminis HAW-EB3, complete genomemethionine synthase4e-1272
NC_014666:3629696:3629696362969636334063711Frankia sp. EuI1c chromosome, complete genomemethionine synthase6e-1271.6
NC_015578:2727684:274160127416012742401801Treponema primitia ZAS-2 chromosome, complete genomemethyl corrinoid protein8e-1270.9
NC_014934:2482934:2490060249006024927922733Cellulophaga algicola DSM 14237 chromosome, complete genomemethionine synthase1e-1170.1
NC_014206:2941575:2965745296574529691553411Geobacillus sp. C56-T3 chromosome, complete genomemethionine synthase2e-1169.3
NC_013851:1866523:1885167188516718889283762Allochromatium vinosum DSM 180 chromosome, complete genomemethionine synthase3e-1169.3
NC_013929:8106492:8106492810649281100193528Streptomyces scabiei 87.22 chromosome, complete genomemethionine synthase3e-1168.9
NC_014829:3562478:3562478356247835659153438Bacillus cellulosilyticus DSM 2522 chromosome, complete genomemethionine synthase5e-1168.6
NC_007777:135222:1352221352221390013780Frankia sp. CcI3, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase6e-1167.8
NC_004463:1520303:1544163154416315480203858Bradyrhizobium japonicum USDA 110, complete genomemethionine synthase1e-1067.4
NC_016616:760145:7834727834727871523681Dechlorosoma suillum PS chromosome, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase1e-1067.4
NC_014972:2980974:2992461299246129949082448Desulfobulbus propionicus DSM 2032 chromosome, complete genomemethionine synthase2e-1066.6
NC_010814:2275199:2275199227519922787083510Geobacter lovleyi SZ, complete genomemethionine synthase1e-1066.6
NC_013960:2592389:2606668260666826103633696Nitrosococcus halophilus Nc4 chromosome, complete genomemethionine synthase2e-1066.2
NC_014815:5888934:5900807590080759043223516Micromonospora sp. L5 chromosome, complete genomemethionine synthase2e-1066.2
NC_010162:10764788:1076845110768451107722963846Sorangium cellulosum 'So ce 56', complete genomemethionine synthase3e-1065.9
NC_015138:272500:2929372929372956602724Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemethionine synthase3e-1065.5
NC_008786:18688:2143021430241652736Verminephrobacter eiseniae EF01-2, complete genomemethionine synthase3e-1065.5
NC_008571:365047:3828973828973860373141Gramella forsetii KT0803, complete genome5-methyltetrahydrofolate:homocysteine methyltran sferase-cobalamin binding domain5e-1065.1
NC_016112:562570:5776805776805813513672Methylomicrobium alcaliphilum chromosome, complete genomemethionine synthase2e-0963.2
NC_003047:3202125:3225354322535432291273774Sinorhizobium meliloti 1021, complete genomePROBABLE 5-METHYLTETRAHYDROFOLATE--HOMOCYSTEINE METHYLTRANSFERASE (METHIONINE SYNTHASE, VITAMIN-B12 DEPENDENT ISOZYME) PROTEIN3e-0962.8
NC_013159:2913927:2913927291392729174813555Saccharomonospora viridis DSM 43017, complete genomemethionine synthase (B12-dependent)3e-0962.4
NC_012489:652319:6542256542256579623738Gemmatimonas aurantiaca T-27, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase5e-0961.6
NC_018866:1706000:1726908172690817304323525Dehalobacter sp. DCA chromosome, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase1e-0860.8
NC_016801:1255611:1282309128230912859113603Corynebacterium diphtheriae C7 (beta) chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase5e-0858.5
NC_016783:1239293:1263118126311812667203603Corynebacterium diphtheriae INCA 402 chromosome, complete genome5-methyltetrahydrofolate- homocysteinemethyltransferase4e-0858.5
NC_002935:1237585:1263485126348512670903606Corynebacterium diphtheriae NCTC 13129, complete genome5-methyltetrahydrofolate--homocysteine methyltransferase4e-0858.5
NC_016782:1227246:1237249123724912408513603Corynebacterium diphtheriae 241 chromosome, complete genome5-methyltetrahydrofolate- homocysteinemethyltransferase4e-0858.5
NC_016786:1218032:1237218123721812408203603Corynebacterium diphtheriae HC01 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016787:1207488:1226674122667412302763603Corynebacterium diphtheriae HC03 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016788:1214026:1236661123666112402633603Corynebacterium diphtheriae HC04 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016790:1177349:1204051120405112076533603Corynebacterium diphtheriae VA01 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016800:1243000:1265647126564712692493603Corynebacterium diphtheriae BH8 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016802:1212726:1236551123655112401533603Corynebacterium diphtheriae HC02 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016789:1257392:1281216128121612848183603Corynebacterium diphtheriae PW8 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016799:1268706:1292531129253112961333603Corynebacterium diphtheriae 31A chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase4e-0858.5
NC_016785:1193471:1217297121729712208993603Corynebacterium diphtheriae CDCE 8392 chromosome, complete genome5-methyltetrahydrofolate-- homocysteinemethyltransferase6e-0858.2