Pre_GI: BLASTP Hits

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Query: NC_014323:4665610:4713629 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4713629, End: 4714528, Length: 900

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:2143376:216897021689702169842873Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-127454
NC_012880:2778795:279660227966022797483882Dickeya dadantii Ech703, complete genomeAllophanate hydrolase subunit 12e-115415
NC_012721:1686450:168558516855851686460876Burkholderia glumae BGR1 chromosome 2, complete genomeAllophanate hydrolase subunit 17e-106383
NC_015259:734795:763428763428764303876Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAllophanate hydrolase, subunit 11e-101369
NC_014378:525717:533770533770534486717Acetohalobium arabaticum DSM 5501 chromosome, complete genomeAllophanate hydrolase subunit 11e-1687
NC_013522:736339:742230742230742970741Thermanaerovibrio acidaminovorans DSM 6589, complete genomeAllophanate hydrolase subunit 14e-1685.5
NC_015379:1600715:1619958161995816235873630Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Urea carboxylase (Allophanate hydrolase subunit 2)2e-1480.1
NC_008260:2142311:2165432216543221690193588Alcanivorax borkumensis SK2, complete genomeurea carboxylase/allophanate hydrolase4e-1479
NC_013959:83992:8399283992876153624Sideroxydans lithotrophicus ES-1 chromosome, complete genomeurea carboxylase1e-1377.4
NC_010995:3197686:3197686319768632013033618Cellvibrio japonicus Ueda107, complete genomeurea amidolyase homolog2e-1376.3
NC_014632:1248611:124940412494041250159756Ilyobacter polytropus DSM 2926 chromosome, complete genomeallophanate hydrolase subunit 12e-1376.3
NC_013956:4490000:4505944450594445095493606Pantoea ananatis LMG 20103 chromosome, complete genomeDUR1,25e-1375.1
NC_013850:2685835:2682233268223326858383606Klebsiella variicola At-22 chromosome, complete genomeurea carboxylase1e-1274.3
NC_011094:842038:844607844607845263657Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1274.3
NC_003198:751779:754348754348755004657Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-1374.3
NC_004631:2205821:222609122260912226747657Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein9e-1374.3
NC_003197:776238:778807778807779463657Salmonella typhimurium LT2, complete genomeputative carboxylase9e-1374.3
NC_016810:775649:778218778218778874657Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-1374.3
NC_016832:2201860:222285622228562223512657Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-1374.3
NC_016856:776735:779304779304779960657Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative carboxylase9e-1374.3
NC_011283:2684046:2684046268404626876513606Klebsiella pneumoniae 342 chromosome, complete genomeurea carboxylase8e-1374.3
NC_017046:775636:778205778205778861657Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-1374.3
NC_016863:776734:779303779303779959657Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative carboxylase9e-1374.3
NC_016860:816000:816860816860817516657Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-1374.3
NC_016857:775649:778218778218778874657Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative carboxylase9e-1374.3
NC_015275:521436:5261765261765297693594Clostridium lentocellum DSM 5427 chromosome, complete genomeurea carboxylase1e-1273.9
NC_018691:761560:7788897788897825453657Alcanivorax dieselolei B5 chromosome, complete genomeUrea amidolyase2e-1273.6
NC_010102:2322866:234457023445702345226657Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1273.6
NC_011083:824659:827228827228827884657Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1273.6
NC_011080:780850:783419783419784075657Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1273.6
NC_006511:2090058:211108021110802111736657Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-1273.6
NC_011147:2085241:210626321062632106919657Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1273.6
NC_016023:915178:9289319289319325333603Bacillus coagulans 36D1 chromosome, complete genomeurea carboxylase2e-1273.6
NC_016817:185000:2064042064042100093606Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceurea carboxylase2e-1273.2
NC_014394:808734:8268268268268304523627Gallionella capsiferriformans ES-2 chromosome, complete genomeurea carboxylase3e-1272.8
NC_007958:2423335:2442099244209924456503552Rhodopseudomonas palustris BisB5, complete genomeAllophanate hydrolase subunit 23e-1272.4
NC_008544:55451:5545155451590683618Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceBiotin carboxylation region5e-1272
NC_015172:775128:7751287751287787723645Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeurea carboxylase6e-1271.6
NC_016825:158626:1684231684231720373615Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12allophanate hydrolase subunit 29e-1271.2
NC_011757:4205794:4224935422493542284653531Methylobacterium chloromethanicum CM4, complete genomeurea carboxylase2e-1170.1
NC_009617:3184924:320796332079633208679717Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeallophanate hydrolase subunit 12e-1169.7
NC_013926:1205443:121838912183891219054666Aciduliprofundum boonei T469 chromosome, complete genomeAllophanate hydrolase subunit 13e-1169.3
NC_011886:177039:1995171995172012051689Arthrobacter chlorophenolicus A6, complete genomeurea amidolyase related protein6e-1168.6
NC_014158:1651326:1666822166682216688131992Tsukamurella paurometabola DSM 20162 chromosome, complete genomeurea amidolyase related protein7e-1168.2
NC_011725:2949519:296069629606962961409714Bacillus cereus B4264 chromosome, complete genomehypothetical protein7e-1168.2
NC_014011:527681:527681527681528436756Aminobacterium colombiense DSM 12261 chromosome, complete genomeAllophanate hydrolase subunit 12e-1066.2
NC_017192:1841987:1863541186354118671373597Arcobacter sp. L, complete genomeurea carboxylase1e-0963.9
NC_000961:888000:898800898800899477678Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0963.9
NC_014934:4164603:418451441845144185251738Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein1e-0963.9
NC_010468:3209326:321097632109763211632657Escherichia coli ATCC 8739, complete genomeAllophanate hydrolase subunit 13e-0962.4
NC_015559:3645181:3654751365475136583773627Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeurea carboxylase4e-0962.4
NC_002163:1471517:147401014740101474750741Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein5e-0962
CP002185:794732:814255814255814911657Escherichia coli W, complete genomepredicted enzyme subunit7e-0961.6
NC_012947:3077922:307957230795723080228657Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeallophanate hydrolase subunit 17e-0961.6
NC_012967:707083:724378724378725034657Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-0961.6
NC_012962:484899:4890644890644907461683Photorhabdus asymbiotica, complete genomehypothetical protein4e-0858.9
NC_015224:1514747:153557515355751536231657Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein7e-0858.2
NC_018644:516157:537998537998538717720Alpha proteobacterium HIMB59 chromosome, complete genomeAllophanate hydrolase subunit 15e-0755.5
NC_012590:637651:6394756394756410221548Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein4e-0652.4
NC_018000:1877183:1878889187888918804841596Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein6e-0652