Pre_GI: BLASTP Hits

Some Help

Query: NC_014034:1036652:1048875 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 1048875, End: 1050500, Length: 1626

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:2009927:2027292202729220288781587Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S2e-72273
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-43175
NC_011831:2213306:2212048221204822133191272Chloroflexus aggregans DSM 9485, complete genomerestriction modification system DNA specificity domain protein5e-38159
NC_013410:1651000:1662625166262516638511227Fibrobacter succinogenes subsp. succinogenes S85 chromosome,restriction modification system DNA specificity domain-containing protein6e-35149
NC_013889:1740858:1753736175373617549951260Thioalkalivibrio sp. K90mix chromosome, complete genomerestriction modification system DNA specificity domain protein4e-34146
NC_010645:558974:5689445689445701641221Bordetella avium 197N, complete genometype i restriction enzyme EcoR124II specificity protein9e-32138
NC_012587:128845:1486971486971501871491Rhizobium sp. NGR234, complete genomeputative restriction endonuclease type I, S subunit3e-30133
NC_007925:4060635:4066717406671740680991383Rhodopseudomonas palustris BisB18, complete genometype I restriction enzyme StySPI specificity protein2e-29131
NC_009656:6224221:6241571624157162432141644Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S3e-29130
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein4e-29129
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-27122
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-25118
NC_014363:1902868:191157019115701912100531Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-24114
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant3e-23110
NC_015565:2408669:2416907241690724181391233Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completerestriction modification system DNA specificity domain-containing protein6e-23109
NC_009434:695582:7172977172977187151419Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit3e-22107
NC_012491:743883:7529087529087541431236Brevibacillus brevis NBRC 100599, complete genomeputative type I restriction modification system specificity protein3e-22106
NC_015416:621513:6339436339436351991257Methanosaeta concilii GP-6 chromosome, complete genometype I restriction-modification enzyme, S subunit7e-22105
NC_009720:1248866:1263097126309712644491353Xanthobacter autotrophicus Py2, complete genomerestriction modification system DNA specificity subunit2e-21103
NC_015844:3159046:3159046315904631604521407Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, S subunit8e-2099
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit2e-1997.8
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain4e-1996.7
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR4e-1996.7
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS4e-1996.7
NC_014253:431942:4581784581784595631386Methanohalobium evestigatum Z-7303 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1895.1
NC_012968:239476:2505692505692517621194Methylotenera mobilis JLW8, complete genomerestriction modification system DNA specificity domain protein1e-1895.1
NC_019896:3311000:3323359332335933246391281Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-1894.4
NC_018876:1061682:1092892109289210942621371Methanolobus psychrophilus R15 chromosome, complete genomehsdS7e-1892.4
NC_009712:1008000:1014213101421310155861374Candidatus Methanoregula boonei 6A8, complete genomerestriction modification system DNA specificity subunit7e-1892.4
NC_007778:3470661:3484682348468234859171236Rhodopseudomonas palustris HaA2, complete genomeRestriction modification system DNA specificity domain9e-1892
NC_014814:2588628:2629651262965126309191269Mycobacterium sp. Spyr1 chromosome, complete genomerestriction endonuclease S subunit2e-1791.3
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit5e-1789.7
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit7e-1789.4
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain9e-1789
NC_016887:3286436:3326449332644933275851137Nocardia cyriacigeorgica GUH-2, complete genomeType I restriction-modification enzyme S subunit, specificity-determinant1e-1689
NC_015500:484984:5002385002385014611224Treponema brennaborense DSM 12168 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1686.7
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit5e-1686.3
NC_006510:372826:3786463786463796861041Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system S subunit5e-1686.3
NC_014394:3114648:3132320313232031340411722Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction modification system DNA specificity domain2e-1584.3
NC_010831:173499:1827671827671850942328Chlorobium phaeobacteroides BS1, complete genomeN-6 DNA methylase3e-1584
NC_013967:2103968:2130371213037121316031233Haloferax volcanii DS2 chromosome, complete genometype I restriction-modification system specificity subunit3e-1584
NC_016838:85487:9616296162973581197Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,Restriction modification system DNA specificity domain protein3e-1583.6
NC_010175:2488000:2494129249412924954451317Chloroflexus aurantiacus J-10-fl, complete genomerestriction modification system DNA specificity domain2e-1481.3
NC_014206:411143:4175314175314187451215Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1480.9
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit2e-1480.9
NC_015216:1102837:1118283111828311194941212Methanobacterium sp. AL-21 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-1479.7
NC_016816:1137904:1156994115699411586911698Pantoea ananatis LMG 5342, complete genometype I restriction modification DNA specificity domain protein6e-1479.3
NC_016514:506611:5236505236505248611212Enterobacter cloacae EcWSU1 chromosome, complete genometype-1 restriction enzyme specificity protein7e-1479.3
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein8e-1479
NC_012917:3241196:3252422325242232535941173Pectobacterium carotovorum subsp. carotovorum PC1, complete genomerestriction modification system DNA specificity domain protein1e-1378.2
NC_016593:416661:4224874224874236651179Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein4e-1377
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein8e-1375.9
NC_018607:1505908:1518405151840515196521248Brachyspira pilosicoli B2904 chromosome, complete genometype I restriction-modification enzyme S subunit1e-1275.1
NC_003272:3275413:3277624327762432789071284Nostoc sp. PCC 7120, complete genometype I restriction-modification enzyme S subunit3e-1273.9
NC_015740:141910:1526751526751538201146Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeType I restriction modification DNA specificity domain-containing protein4e-1273.6
NC_014216:1197704:1203140120314012045161377Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-1272.8
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-1171.2
NC_004463:5540924:5557859555785955591601302Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein7e-1169.3
NC_015578:465814:4757814757814771931413Treponema primitia ZAS-2 chromosome, complete genomedna methylase-type I restriction-modification system9e-1168.9
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1068.6
NC_007969:2885249:2901693290169329029341242Psychrobacter cryohalolentis K5, complete genomerestriction modification system DNA specificity domain1e-1068.2
NC_009656:44500:8547085470868641395Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S3e-1067.4
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS23e-1067.4
NC_008346:2579756:2600348260034826015891242Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease S subunits-like protein3e-1067.4
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein7e-1065.9
NC_014970:530748:535491535491536114624Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system, S subunit8e-1065.9
NC_007948:1972290:2002112200211220034671356Polaromonas sp. JS666, complete genomeRestriction endonuclease S subunits-like1e-0965.5
NC_007760:2611608:2627991262799126292051215Anaeromyxobacter dehalogenans 2CP-C, complete genometype I restriction-modification system specificity subunit1e-0965.1
NC_009925:2240871:2242037224203722437581722Acaryochloris marina MBIC11017, complete genometype I restriction-modification system S subunit2e-0964.7
NC_004347:4441110:4439626443962644411131488Shewanella oneidensis MR-1, complete genometype I restriction-modification system, S subunit2e-0964.7
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit3e-0963.9
NC_015138:5342473:5353136535313653544401305Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completerestriction modification system DNA specificity domain-containing protein3e-0963.9
NC_011601:4856717:4865866486586648670921227Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme S subunit3e-0963.5
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein3e-0963.5
NC_016612:2009927:2018525201852520200031479Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system subunit S4e-0963.5
NC_016638:429437:434801434801435397597Mycoplasma haemocanis str. Illinois chromosome, complete genometype I restriction-modification system subunit S5e-0963.2
NC_010617:558954:5701515701515713471197Kocuria rhizophila DC2201, complete genometype I restriction enzyme S protein5e-0963.2
NC_014220:1162948:1167996116799611692641269Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-0962.4
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein9e-0962.4
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein9e-0962.4
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0862
NC_013720:5769910:5786880578688057884331554Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity subunit1e-0862
NC_018721:943801:9501419501419514091269Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit HdsS2e-0861.2
NC_020209:4768500:4777702477770247788471146Pseudomonas poae RE*1-1-14, complete genomerestriction modification system DNA specificity subunit3e-0860.8
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0860.8
NC_015856:1:1045910459117301272Collimonas fungivorans Ter331 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0860.5
NC_015580:293803:2967442967442980541311Novosphingobium sp. PP1Y, complete genomeputative type I restriction-modification system specificity subunit3e-0860.5
NC_014165:2928464:2938022293802229392271206Thermobispora bispora DSM 43833 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0860.1
NC_013959:2449315:2462541246254124638211281Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-0860.1
NC_013595:8338619:8351286835128683524941209Streptosporangium roseum DSM 43021, complete genomeRestriction endonuclease S subunits-like protein8e-0859.3
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit8e-0859.3
NC_007575:973559:9842349842349854961263Sulfurimonas denitrificans DSM 1251, complete genomerestriction modification system DNA specificity subunit7e-0859.3
NC_012793:1718000:1721130172113017224161287Geobacillus sp. WCH70, complete genomerestriction modification system DNA specificity domain protein9e-0858.9
NC_018012:598724:6157906157906170821293Thiocystis violascens DSM 198 chromosome, complete genomerestriction endonuclease S subunit1e-0758.9
NC_012796:1645856:1674407167440716756901284Desulfovibrio magneticus RS-1, complete genometype I restriction enzyme S protein1e-0758.2
NC_014098:3008951:302965330296533030273621Bacillus tusciae DSM 2912 chromosome, complete genomerestriction endonuclease S subunits1e-0758.2
NC_020541:4122852:4135453413545341367511299Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit2e-0758.2
NC_015740:3631326:3647442364744236487821341Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-0757.8
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein3e-0757.4
NC_014034:1418681:1425744142574414274261683Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit S3e-0757
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain3e-0757
NC_014762:890914:9015629015629027821221Sulfuricurvum kujiense DSM 16994 chromosome, complete genomerestriction modification system DNA specificity domain3e-0757
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain4e-0756.6
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein5e-0756.6
NC_016943:4799915:481102148110214811941921Blastococcus saxobsidens DD2, complete genomeRestriction endonuclease S subunit6e-0756.2
NC_014652:420457:4231894231894246341446Caldicellulosiruptor hydrothermalis 108 chromosome, completerestriction modification system DNA specificity domain protein6e-0756.2
NC_016629:3789554:3799536379953638008641329Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction modification system DNA specificity domain-containing protein8e-0755.8
NC_021184:1024305:1030479103047910316841206Desulfotomaculum gibsoniae DSM 7213, complete genomerestriction endonuclease S subunit8e-0755.8
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit8e-0755.8
NC_018691:3437821:3449748344974834512081461Alcanivorax dieselolei B5 chromosome, complete genomeRestriction modification system DNA specificity domain protein1e-0655.5
NC_012779:996879:1000949100094910023341386Edwardsiella ictaluri 93-146, complete genometype I restriction-modification system, S subunit1e-0655.5
NC_015458:2338437:2362859236285923641781320Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-0655.5
NC_004369:256262:2803292803292815581230Corynebacterium efficiens YS-314, complete genomeputative restriction enzyme subunit S2e-0654.7
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0654.7
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S3e-0653.9
NC_007677:1354500:1382294138229413835201227Salinibacter ruber DSM 13855, complete genometype I restriction-modification system, S subunit, putative4e-0653.5
NC_019978:1066000:1070757107075710721091353Halobacteroides halobius DSM 5150, complete genomerestriction endonuclease S subunit4e-0653.5
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-0653.1
NC_015703:3880903:389345038934503893758309Runella slithyformis DSM 19594 chromosome, complete genometype I restriction-modification system, S subunit6e-0653.1