Pre_GI: BLASTP Hits

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Query: NC_013941:4470932:4476749 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 4476749, End: 4477513, Length: 765

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:4643825:464840246484024649148747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector2e-113408
NC_002695:4584177:458925745892574590003747Escherichia coli O157:H7 str. Sakai, complete genomeEspF2e-113408
NC_002655:4653160:465824046582404658986747Escherichia coli O157:H7 EDL933, complete genomeespF2e-113408
NC_013364:3701895:372061137206113721399789Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspF1e-83309
NC_013353:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspF9e-78290
AP010958:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspF9e-78290
NC_011601:4096427:410327141032714103891621Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLEE-encoded effector EspF5e-75280
NC_013716:3109700:314688131468813147786906Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspF3e-74278
NC_011353:4688000:469236146923614692798438Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspF2e-67255
NC_013361:5319497:536404553640455364668624Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspF1e-59229
NC_011353:1195179:121414312141431214895753Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-1169.3
NC_013008:2561586:2576142257614225771551014Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeTir-cytoskeleton coupling protein (TccP)4e-1168.6
NC_002695:2655445:2669551266955126705641014Escherichia coli O157:H7 str. Sakai, complete genomeEspF-like protein4e-1168.6
NC_002655:2730659:2744768274476827459221155Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U8e-1167.4
NC_011353:2563056:257746525774652578175711Escherichia coli O157:H7 str. EC4115 chromosome, complete genometir-cytoskeleton coupling protein2e-1066.6
NC_013941:2425233:243933924393392440211873Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTir-cytoskeleton coupling protein6e-1064.7