Pre_GI: BLASTP Hits

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Query: NC_013929:3986272:4005391 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4005391, End: 4006197, Length: 807

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:5499447:554217355421735542841669Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family7e-59227
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator1e-0860.8
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family1e-0860.8
NC_010338:588000:606741606741607427687Caulobacter sp. K31, complete genometranscriptional regulator, TetR family5e-0858.5
NC_009634:299327:323157323157323735579Methanococcus vannielii SB chromosome, complete genomeTetR family transcriptional regulator8e-0857.8
NC_014624:2549219:255685025568502557506657Eubacterium limosum KIST612 chromosome, complete genomeTetR family transcriptional regulator1e-0757.4
NC_011296:1542835:154922215492221549848627Thermodesulfovibrio yellowstonii DSM 11347, complete genometranscriptional regulator, TetR family1e-0757
NC_014152:927969:945497945497946150654Thermincola sp. JR, complete genometranscriptional regulator, TetR family1e-0757
NC_009637:1421885:142340014234001423993594Methanococcus maripaludis C7 chromosome, complete genomeTetR family transcriptional regulator1e-0757
NC_013510:3117837:314603831460383146595558Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family2e-0756.2
NC_014335:2274774:227990022799002280316417Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator3e-0755.8
NC_008600:2353696:236310023631002363594495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family4e-0755.5
NC_009464:931647:953666953666954247582Uncultured methanogenic archaeon RC-I, complete genometranscription regulator (TetR family)4e-0755.5
NC_013517:3453500:347279434727943473399606Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, TetR family5e-0755.1
NC_011772:4565418:458020945802094580847639Bacillus cereus G9842, complete genometranscriptional regulator, TetR family7e-0754.7
NC_016027:1647110:165207416520741652781708Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator9e-0754.3
NC_014220:2037560:204191920419192042590672Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometranscriptional regulator, TetR family9e-0754.3
NC_011725:4600000:461495346149534615591639Bacillus cereus B4264 chromosome, complete genomeTetR family transcriptional regulator9e-0754.3
NC_014393:4988127:499140449914044992006603Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, TetR family8e-0754.3
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR1e-0653.9
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator1e-0653.9
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family2e-0653.5
NC_015563:5162177:517872451787245179383660Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR2e-0653.5
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator2e-0653.5
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR2e-0653.1
NC_010397:815549:830731830731831375645Mycobacterium abscessus chromosome Chromosome, complete sequencePutative transcriptional regulator, TetR family3e-0652.8
NC_003888:4377000:438203043820304382620591Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator3e-0652.4
NC_009092:3682413:368449236844923685076585Shewanella loihica PV-4, complete genometranscriptional regulator, TetR family3e-0652.4
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator3e-0652.4
NC_009725:2784334:278513627851362785759624Bacillus amyloliquefaciens FZB42, complete genomeYttP5e-0652
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family5e-0651.6
NC_006512:952894:971350971350971976627Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, TetR family5e-0651.6
UCMB5137:2418403:241840324184032419026624Bacillus atrophaeus UCMB-5137transcriptional regulator, TetR family8e-0651.2
NC_010681:74587:851168511685775660Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, TetR family8e-0651.2
NC_014639:2452286:245307424530742453715642Bacillus atrophaeus 1942 chromosome, complete genomeTetR family transcriptional regulator8e-0650.8
CP002207:2452286:245307424530742453715642Bacillus atrophaeus 1942, complete genometranscriptional regulator, TetR family8e-0650.8
NC_013406:3672857:371832137183213719007687Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator1e-0550.8