Pre_GI: BLASTP Hits

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Query: NC_013890:1142500:1161954 Dehalococcoides sp. GT chromosome, complete genome

Start: 1161954, End: 1164059, Length: 2106

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020387:1257163:1283606128360612857052100Dehalococcoides mccartyi BTF08, complete genomehypothetical protein01195
NC_007356:1165760:1170232117023211724392208Dehalococcoides sp. CBDB1, complete genomehypothetical protein0742
NC_013890:1142500:1147830114783011500282199Dehalococcoides sp. GT chromosome, complete genomeToprim sub domain protein0719
NC_013552:1187299:1193585119358511957832199Dehalococcoides sp. VS, complete genomehypothetical protein0719
NC_020387:1257163:1262937126293712651352199Dehalococcoides mccartyi BTF08, complete genomehypothetical protein0719
NC_010572:3363830:3402780340278034039431164Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-55218
NC_012918:1174412:1180315118031511816071293Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-50201
NC_014972:480355:4964064964064988622457Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein2e-49198
NC_014006:3124818:3136221313622131374411221Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein5e-49196
NC_013729:380312:3980783980783994301353Kribbella flavida DSM 17836, complete genomehypothetical protein8e-49195
NC_013729:3573000:3591414359141435927241311Kribbella flavida DSM 17836, complete genomehypothetical protein1e-48194
NC_016114:3439273:3462020346202034633331314Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein2e-48194
NC_003295:2669480:2689399268939926919452547Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-48194
NC_017186:361444:3696623696623710111350Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-48194
NC_013929:5850599:5854112585411258551821071Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein7e-48192
NC_014532:752807:7691457691457707041560Halomonas elongata DSM 2581, complete genomehypothetical protein1e-46188
NC_016109:3591401:3625584362558436267981215Kitasatospora setae KM-6054, complete genomehypothetical protein5e-46186
NC_021150:1677811:1681155168115516828701716Azotobacter vinelandii CA6, complete genomehypothetical protein9e-46185
NC_012560:1677798:1681142168114216828571716Azotobacter vinelandii DJ, complete genomehypothetical protein9e-46185
NC_017186:9604427:9627210962721096287421533Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-45185
NC_014318:9604367:9627150962715096286821533Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-45185
NC_009142:7820251:7837506783750678388221317Saccharopolyspora erythraea NRRL 2338, complete genomepossible phiRv2 prophage protein2e-45184
NC_017186:3694:1612916129176851557Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein6e-45182
NC_014318:3691:1612916129176851557Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein6e-45182
NC_015656:5084767:5090456509045650917421287Frankia symbiont of Datisca glomerata chromosome, complete genomeputative phiRv2 prophage protein8e-45182
NC_008726:1533727:1540448154044815417791332Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein1e-44181
NC_018750:5293829:5314046531404653159471902Streptomyces venezuelae ATCC 10712, complete genomeDNA primase3e-44180
NC_009720:1248866:1251196125119612529681773Xanthobacter autotrophicus Py2, complete genomeAAA ATPase5e-44179
NC_015953:3456535:3474385347438534756951311Streptomyces sp. SirexAA-E chromosome, complete genomeputative phiRv2 prophage protein1e-43178
NC_009455:53000:7679976799794022604Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein3e-40167
NC_014168:1411310:1411310141131014124311122Segniliparus rotundus DSM 44985 chromosome, complete genomeputative phiRv2 prophage protein5e-40166
NC_008751:1043269:1083858108385810860742217Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid/phage primase, P4 family2e-38161
NC_014010:175500:1813701813701832171848Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeAAA ATPase2e-37157
NC_014365:2843126:2849838284983828520722235Desulfarculus baarsii DSM 2075 chromosome, complete genomephage/plasmid primase, P4 family2e-35151
NC_011899:355638:3610733610733635202448Halothermothrix orenii H 168, complete genomehypothetical protein3e-35150
NC_014365:2888897:2892843289284328950922250Desulfarculus baarsii DSM 2075 chromosome, complete genomephage/plasmid primase, P4 family6e-35149
NC_019897:3810000:3853817385381738559282112Thermobacillus composti KWC4 chromosome, complete genomephage/plasmid primase, P4 family, C-terminal domain-containing protein2e-29131
NC_002936:797110:8120828120828146882607Dehalococcoides ethenogenes 195, complete genomeDNA primase domain protein2e-29131
NC_002936:253760:2646702646702672762607Dehalococcoides ethenogenes 195, complete genomeDNA primase domain protein2e-29131
NC_015953:3227000:324716332471633247918756Streptomyces sp. SirexAA-E chromosome, complete genomeputative phiRv2 prophage protein3e-26120
NC_013441:1221472:1241187124118712429351749Gordonia bronchialis DSM 43247, complete genome3e-23110
NC_015064:2341152:2357298235729823585211224Acidobacterium sp. MP5ACTX9 chromosome, complete genomehypothetical protein3e-1790.9
NC_015957:8777644:8785823878582387881682346Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein7e-1789.7
NC_016078:913713:9222689222689244572190Pelagibacterium halotolerans B2 chromosome, complete genomehypothetical protein3e-1584.3
NC_013757:2046000:2051466205146620536222157Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein8e-1376.3
NC_012522:4299287:4308017430801743100172001Rhodococcus opacus B4, complete genomehypothetical protein5e-0963.5
NC_014963:113015:1318361318361331851350Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein1e-0862.4
NC_012559:1635922:1653880165388016556671788Laribacter hongkongensis HLHK9, complete genomeinner membrane protein3e-0861.2
NC_010981:1371265:1390240139024013923992160Wolbachia pipientis, complete genomeputative phage related protein4e-0860.5
NC_002978:549454:5641755641755662232049Wolbachia endosymbiont of Drosophila melanogaster, complete genomeregulatory protein RepA, putative5e-0860.1
NC_006363:36959:3695936959398052847Nocardia farcinica IFM 10152 plasmid pNF2, complete sequencehypothetical protein9e-0859.3
NC_012416:573202:6051756051756073702196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-0758.5
NC_012416:1079661:1111634111163411138292196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-0758.5
NC_013552:207345:2122382122382144212184Dehalococcoides sp. VS, complete genomehypothetical protein3e-0757.4
NC_008609:2446246:248101724810172481829813Pelobacter propionicus DSM 2379, complete genomehypothetical protein5e-0757
NC_007645:6500059:6527937652793765291901254Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-0655.5