Pre_GI Gene

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Host: NC_013552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013552:207345 Dehalococcoides sp. VS, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2073452090361692resolvase domain protein PinR typeQuickGO ontologyBLASTP
208970209947978hypothetical protein
209969210367399hypothetical proteinBLASTP
210730210990261DNA-binding domain protein HTH_XREQuickGO ontology
211260212210951hypothetical protein
2122382144212184hypothetical proteinBLASTP
214950215264315molecular chaperone DnaJ-familyQuickGO ontology
215255216193939Holliday junction DNA helicaseQuickGO ontologyBLASTP
216362217174813hypothetical protein
217176217454279hypothetical protein
218115218327213hypothetical proteinBLASTP
218457218669213hypothetical protein
218713218910198hypothetical protein
218944219531588hypothetical protein
219549220076528hypothetical protein
220243220794552hypothetical protein
220794221261468hypothetical protein
2212622224791218hypothetical proteinBLASTP
222491223228738hypothetical proteinBLASTP
223241223987747hypothetical proteinBLASTP
2240172252731257subtilisin-like serine protease precursorQuickGO ontologyBLASTP
225458225787330hypothetical protein
225787226173387hypothetical proteinBLASTP
226184226786603hypothetical proteinBLASTP
226795227268474hypothetical proteinBLASTP
227265227960696site-specific recombinase phage integrase familyQuickGO ontologyBLASTP