Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:4885776:4894669 Citrobacter rodentium ICC168, complete genome

Start: 4894669, End: 4895001, Length: 333

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:528296:528926528926529258333Enterobacteriaceae bacterium strain FGI 57, complete genomeputative RNA-binding protein, YhbY family5e-58222
NC_015968:4117835:416021741602174160549333Enterobacter asburiae LF7a chromosome, complete genomeRNA-binding, CRM domain-containing protein2e-55213
NC_012880:3915500:392839139283913928684294Dickeya dadantii Ech703, complete genomeprotein of unknown function UPF00443e-42170
NC_013416:939668:941822941822942124303Aggregatibacter actinomycetemcomitans D11S-1, complete genome23S rRNA methyltransferase J1e-35147
NC_010519:1684901:168543216854321685728297Haemophilus somnus 2336 chromosome, complete genomehypothetical protein2e-33140
NC_015581:771482:774846774846775145300Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA-binding, CRM domain-containing protein1e-1891.7
NC_007484:1823751:182921418292141829504291Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein7e-1889.4
NC_009654:1123709:113499311349931135295303Marinomonas sp. MWYL1, complete genomehypothetical protein3e-1683.6
NC_021150:4311902:432981343298134330127315Azotobacter vinelandii CA6, complete genomehypothetical protein1e-1581.6
NC_012560:4311906:432981743298174330131315Azotobacter vinelandii DJ, complete genomehypothetical protein1e-1581.6
NC_009465:90000:118296118296118598303Candidatus Vesicomyosocius okutanii HA, complete genomehypothetical protein2e-1581.3
NC_004129:957890:964361964361964669309Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-1579.7
NC_013192:305478:338045338045338383339Leptotrichia buccalis DSM 1135, complete genomeprotein of unknown function UPF00449e-1268.9
NC_021175:1291707:129170712917071292018312Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-1064.3
NC_009943:1262000:127581412758141276119306Candidatus Desulfococcus oleovorans Hxd3, complete genomeprotein of unknown function UPF00442e-1064.3
NC_009699:3217315:322010032201003220393294Clostridium botulinum F str. Langeland chromosome, complete genomeRNA-binding protein5e-1063.2
NC_009698:3046833:304961830496183049911294Clostridium botulinum A str. Hall chromosome, complete genomeRNA-binding protein5e-1063.2
NC_010516:3234791:323757632375763237869294Clostridium botulinum B1 str. Okra, complete genomeputative RNA-binding protein5e-1063.2
NC_014720:1737574:174488417448841745171288Caldicellulosiruptor kronotskyensis 2002 chromosome, completehypothetical protein7e-1062.8
NC_018515:4196409:422608542260854226378294Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRNA-binding protein8e-1062.4
NC_021182:2160580:218525221852522185545294Clostridium pasteurianum BC1, complete genomeputative RNA-binding protein, YhbY family1e-0961.6
NC_011145:306623:310106310106310618513Anaeromyxobacter sp. K, complete genomeprotein of unknown function UPF00443e-0960.5
NC_011891:315182:318653318653319186534Anaeromyxobacter dehalogenans 2CP-1, complete genomeprotein of unknown function UPF00444e-0960.1
NC_016938:1492486:149248614924861492797312Melissococcus plutonius DAT561 chromosome 1, complete genomeRNA binding protein4e-0857
NC_010524:3094303:310558631055863105993408Leptothrix cholodnii SP-6, complete genomeprotein of unknown function UPF00442e-0754.7
NC_017068:2436960:243696024369602437262303Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein5e-0650.1